RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ADNP2Q6IQ32 1131 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 WDR74Q6RFH5 385 aaPredicted RBP14.55□□□□□ -0.08
CCDC140-201ENST00000295226 SLCO6A1Q86UG4 719 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 PLXDC1Q8IUK5 500 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 RNF175Q8N4F7 328 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 MTFMTQ96DP5 389 aaKnown RBP14.55□□□□□ -0.08
CCDC140-201ENST00000295226 ZDHHC12Q96GR4 267 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 TRAPPC9Q96Q05 1148 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 GFM1Q96RP9 751 aaKnown RBP14.55□□□□□ -0.08
CCDC140-201ENST00000295226 ZNF382Q96SR6 550 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 SIKE1Q9BRV8 207 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 NTMT1Q9BV86 223 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 EPB41L1Q9H4G0 881 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 SYNPO2LQ9H987 977 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 GEMIN8Q9NWZ8 242 aaKnown RBP14.55□□□□□ -0.08
CCDC140-201ENST00000295226 MARCOQ9UEW3 520 aaPredicted RBP14.55□□□□□ -0.08
CCDC140-201ENST00000295226 EPHA6Q9UF33 1036 aa14.55□□□□□ -0.08
CCDC140-201ENST00000295226 CNOT1A5YKK6 2376 aaKnown RBP14.54□□□□□ -0.08
CCDC140-201ENST00000295226 MATN2O00339 956 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 NTN3O00634 580 aaPredicted RBP14.54□□□□□ -0.08
CCDC140-201ENST00000295226 HAT1O14929 419 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 ZW10O43264 779 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 LCMT2O60294 686 aaKnown RBP14.54□□□□□ -0.08
CCDC140-201ENST00000295226 CCNDBP1O95273 360 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 CAPN1P07384 714 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 CCR8P51685 355 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 ABATP80404 500 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC140-201ENST00000295226 SGO1Q5FBB7 561 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 SH2D4BQ5SQS7 431 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 ATG9BQ674R7 924 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 TMEM71Q6P5X7 295 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 SCIMPQ6UWF3 145 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 PACS2Q86VP3 889 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 FAM129CQ86XR2 697 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 RCBTB1Q8NDN9 531 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 ABHD11Q8NFV4 315 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 RAB33BQ9H082 229 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 FAM60AQ9NP50 221 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 SAR1AQ9NR31 198 aa14.54□□□□□ -0.08
CCDC140-201ENST00000295226 ZNF490Q9ULM2 529 aaPredicted RBP14.54□□□□□ -0.08
CCDC140-201ENST00000295226 MDC1Q14676 2089 aaKnown RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 KCNE1BA0A087WTH5 132 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 TM4SF5O14894 197 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 HCRTR1O43613 425 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 CTSVO60911 334 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 UNC5CO95185 931 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 ESRRBO95718 433 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 C9P02748 559 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 GP1BAP07359 652 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 EBLN1P0CF75 366 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 NEK2P51955 445 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 NCALDP61601 193 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 CYP4F3Q08477 520 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 SQSTM1Q13501 440 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 KCNAB1Q14722 419 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 ZNF425Q6IV72 752 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 FBXO42Q6P3S6 717 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 B3GNT8Q7Z7M8 397 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 PAQR7Q86WK9 346 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 OR4K1Q8NGD4 311 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 NETO1Q8TDF5 533 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 THOC1Q96FV9 657 aaKnown RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 HBEGFQ99075 208 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 TRMOQ9BU70 441 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 ILKAPQ9H0C8 392 aaPredicted RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 EML4Q9HC35 981 aaKnown RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 C1GALT1Q9NS00 363 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 FARSBQ9NSD9 589 aaKnown RBP14.53□□□□□ -0.08
CCDC140-201ENST00000295226 TMEM184CQ9NVA4 438 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 TRAF6Q9Y4K3 522 aa14.53□□□□□ -0.08
CCDC140-201ENST00000295226 MN1Q10571 1320 aaPredicted RBP14.52□□□□□ -0.08
CCDC140-201ENST00000295226 IGHV5-10-1A0A0J9YXX1 117 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 TLCD2A6NGC4 264 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 CRCPO75575 148 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 RFPL3O75679 317 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 SPTBP11277 2137 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 HGFP14210 728 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 SERPINB5P36952 375 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 CASP2P42575 452 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 PKNOX1P55347 436 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 SPIDRQ14159 915 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 ZRSR2Q15696 482 aaKnown RBP14.52□□□□□ -0.08
CCDC140-201ENST00000295226 DEFB110Q30KQ9 67 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 DHRS13Q6UX07 377 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 L3MBTL4Q8NA19 623 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 METTL6Q8TCB7 284 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 KLHL29Q96CT2 875 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 PTCD3Q96EY7 689 aaKnown RBP14.52□□□□□ -0.08
CCDC140-201ENST00000295226 CCDC74BQ96LY2 380 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 MACROD1Q9BQ69 325 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 PELI2Q9HAT8 420 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 NPHS2Q9NP85 383 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 SNX7Q9UNH6 387 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 RAP2CQ9Y3L5 183 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 PTGDR2Q9Y5Y4 395 aa14.52□□□□□ -0.08
CCDC140-201ENST00000295226 A0A0J9YVX5 310 aa14.52□□□□□ -0.09
CCDC140-201ENST00000295226 OR2A25A4D2G3 310 aa14.52□□□□□ -0.09
CCDC140-201ENST00000295226 D6RAR5 112 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms