RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 REV3LO60673 3130 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 GABRR3A8MPY1 467 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 TLL1O43897 1013 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 PSIP1O75475 530 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZBTB11O95625 1053 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 TGFB1P01137 390 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 CRHBPP24387 322 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 IGFBP5P24593 272 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 MMP12P39900 470 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 VLDLRP98155 873 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 XKR5Q6UX68 686 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 DCP2Q8IU60 420 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 FAM9CQ8IZT9 166 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 LHPPQ9H008 270 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 FBXO10Q9UK96 956 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 PLAGL1Q9UM63 463 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 RUVBL1Q9Y265 456 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 INSL6Q9Y581 213 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 KCNK5O95279 499 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF182P17025 639 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 FMO3P31513 532 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 BNIP3Q12983 259 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 VMACQ2NL98 169 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 FNDC3BQ53EP0 1204 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 C6orf141Q5SZD1 244 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 CPTPQ5TA50 214 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 HORMAD1Q86X24 394 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 PLPP6Q8IY26 295 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 TPT1P8Q9HAU6 139 aa15.26■□□□□ 0.03
NCKIPSD-201ENST00000294129 MMP20O60882 483 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 EFCAB14O75071 495 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CCNDBP1O95273 360 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 OPN1SWP03999 348 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CYP17A1P05093 508 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 SLC6A11P48066 632 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 TBPL1P62380 186 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 RAPSNQ13702 412 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 LDLRAP1Q5SW96 308 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■■■ 27
NCKIPSD-201ENST00000294129 TECPR1Q7Z6L1 1165 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CYP4Z1Q86W10 505 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 GALNT13Q8IUC8 556 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZZZ3Q8IYH5 903 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 HSH2DQ96JZ2 352 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 IL17FQ96PD4 163 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR51B5Q9H339 312 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 FZD4Q9ULV1 537 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 SAMD4AQ9UPU9 718 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CEP290O15078 2479 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 BCKDKO14874 412 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 AP2A2O94973 939 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 HPRP00739 348 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ADH5P11766 374 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 HOXB9P17482 250 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 TNFRSF1BP20333 461 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 MC1RQ01726 317 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 SRSF11Q05519 484 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CPZQ66K79 652 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 KLHL35Q6PF15 583 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ADAMTS16Q8TE57 1224 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF480Q8WV37 535 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 TIFAQ96CG3 184 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 TMEM121BQ9BXQ6 578 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CHCHD3Q9NX63 227 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 PDP1Q9P0J1 537 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 GULP1Q9UBP9 304 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 TMEFF2Q9UIK5 374 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 SAMHD1Q9Y3Z3 626 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF451Q9Y4E5 1061 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 KCNE2Q9Y6J6 123 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 CCDC88CQ9P219 2028 aa15.25■□□□□ 0.03
NCKIPSD-201ENST00000294129 PRRT4C9JH25 899 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 XYLBO75191 536 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 GPR1P46091 355 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 PRLHRP49683 370 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 NUP107P57740 925 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DCDC1P59894 354 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 RAE1P78406 368 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 CSTF3Q12996 717 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 GAB1Q13480 694 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DMC1Q14565 340 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 CYP27C1Q4G0S4 372 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 C1orf53Q5VUE5 145 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DUS1LQ6P1R4 473 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 TTC23LQ6PF05 361 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DPPA4Q7L190 304 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 PTOV1Q86YD1 416 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ATL1Q8WXF7 558 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ITFG2Q969R8 447 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 KIF17Q9P2E2 1029 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SLC5A10A0PJK1 596 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 PCDH7O60245 1069 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SCN2BO60939 215 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 FGBP02675 491 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 PRPH2P23942 346 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 FSHRP23945 695 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 EPHA2P29317 976 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms