RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CDYL2Q8N8U2 506 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 L3MBTL4Q8NA19 623 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 FAM13CQ8NE31 585 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 ABHD11Q8NFV4 315 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 NCSTNQ92542 709 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 WDR34Q96EX3 536 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 PRR11Q96HE9 360 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 AHCYL2Q96HN2 611 aaKnown RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 PPM1MQ96MI6 270 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CCDC3Q9BQI4 270 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 ABCG4Q9H172 646 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 EPB41L1Q9H4G0 881 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 EHD1Q9H4M9 534 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CXorf56Q9H5V9 222 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 RNPEPL1Q9HAU8 725 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 NPHS2Q9NP85 383 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 SLC6A20Q9NP91 592 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 BATF3Q9NR55 127 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 MARCOQ9UEW3 520 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 POMT2Q9UKY4 750 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 KLHL20Q9Y2M5 609 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 RP1P56715 2156 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 KCNE1BA0A087WTH5 132 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 DCDC2BA2VCK2 349 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 H7BY64 318 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 MATN2O00339 956 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 PEX11AO75192 247 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 KITP10721 976 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 CKMT2P17540 419 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 RPL14P50914 215 aaKnown RBP17.09■□□□□ 0.33
CCDC78-201ENST00000293889 ARFIP2P53365 341 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 GPLD1P80108 840 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 E2F2Q14209 437 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 TBCCQ15814 346 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 LIPJQ5W064 366 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 IRGCQ6NXR0 463 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 RFWD2Q8NHY2 731 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 RSRC1Q96IZ7 334 aaKnown RBP17.09■□□□□ 0.33
CCDC78-201ENST00000293889 PRAP1Q96NZ9 151 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 PELI2Q9HAT8 420 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 EVA1BQ9NVM1 165 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 FTSJ1Q9UET6 329 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
CCDC78-201ENST00000293889 AZIN1O14977 448 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CAPN5O15484 640 aaPredicted RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 DUX1O43812 170 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 UGDHO60701 494 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CAPN1P07384 714 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 HGFP14210 728 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CSRP1P21291 193 aaKnown RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 SDHBP21912 280 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CALB2P22676 271 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 SERPINB3P29508 390 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 GCKP35557 465 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 GRIA3P42263 894 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CCR8P51685 355 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 GFERP55789 205 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 MEF2AQ02078 507 aaPredicted RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CFHR1Q03591 330 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 GGTA1PQ4G0N0 100 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 USP53Q70EK8 1073 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 MTDHQ86UE4 582 aaKnown RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 FAM129CQ86XR2 697 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 CLYBLQ8N0X4 340 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 OR4K1Q8NGD4 311 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 METTL6Q8TCB7 284 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 NSL1Q96IY1 281 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 DPH7Q9BTV6 452 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 RAB33BQ9H082 229 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 SPNS1Q9H2V7 528 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 EPHA6Q9UF33 1036 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 TRPS1Q9UHF7 1281 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 TIMM22Q9Y584 194 aa17.08■□□□□ 0.32
CCDC78-201ENST00000293889 SNRNP200O75643 2136 aaKnown RBP17.08■□□□□ 0.32
CCDC78-201ENST00000293889 FFAR3O14843 346 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 GPR42O15529 346 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 ZW10O43264 779 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 NRP2O60462 931 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CCDC22O60826 627 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CRCPO75575 148 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 JUPP14923 745 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CSF2RBP32927 897 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CSNK1G2P78368 415 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CCL7P80098 99 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 SLBPQ14493 270 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 CPSF6Q16630 551 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 UGT3A2Q3SY77 523 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 TCHHL1Q5QJ38 904 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 KANK2Q63ZY3 851 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 GRHL2Q6ISB3 625 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 ZNF740Q8NDX6 193 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 PIWIL2Q8TC59 973 aaKnown RBP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 THOC1Q96FV9 657 aaKnown RBP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 TGM7Q96PF1 710 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 EFCAB11Q9BUY7 163 aa17.07■□□□□ 0.32
CCDC78-201ENST00000293889 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-201ENST00000293889 TMEM184CQ9NVA4 438 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 792.2 ms