RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MYCLP1P12525 358 aaPredicted RBP17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 CRISP3P54108 245 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 CTBP2P56545 445 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 TIGD5Q53EQ6 642 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 HMBOX1Q6NT76 420 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 IGFN1Q86VF2 1251 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 PQLC3Q8N755 202 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 LRRN3Q9H3W5 708 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 ARVCFO00192 962 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 WNT9AO14904 365 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 GRID2O43424 1007 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 H1F0P07305 194 aaKnown RBP17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 EBLN1P0CF75 366 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 CRHR2Q13324 411 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 NANOGP8Q6NSW7 305 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 C15orf39Q6ZRI6 1047 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 PEBP4Q96S96 227 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 NANOGQ9H9S0 305 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 MARK1Q9P0L2 795 aa17.04■□□□□ 0.32
PCDHA13-201ENST00000289272 FFAR2O15552 330 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ENGP17813 658 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 HAGHLQ6PII5 290 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC2A7Q6PXP3 512 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 TSPYL5Q86VY4 417 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 A0A096LPI6 279 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SOCS2O14508 198 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 NSG1P42857 185 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 CLK3P49761 638 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 NIPAL4Q0D2K0 466 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 GALNT2Q10471 571 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 Q6ZNX1 250 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 DPY19L3Q6ZPD9 716 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 VWA5B2Q8N398 1253 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZNF248Q8NDW4 579 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SIMC1Q8NDZ2 872 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 STOML3Q8TAV4 291 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 TFAP2CQ92754 450 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZNF382Q96SR6 550 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 STRA6Q9BX79 667 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 UCKL1Q9NWZ5 548 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 POP4O95707 220 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 AGR2O95994 175 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 PRKACBP22694 351 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC36A4Q6YBV0 504 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZSWIM9Q86XI8 627 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZNF433Q8N7K0 673 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 OR6K2Q8NGY2 324 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 OR4C6Q8NH72 309 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZBED6CLQ96FA7 236 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SH3YL1Q96HL8 342 aaPredicted RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 MAELQ96JY0 434 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 HSH2DQ96JZ2 352 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC39A3Q9BRY0 314 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 FZD4Q9ULV1 537 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 MRPS17Q9Y2R5 130 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ANXA2P2A6NMY6 339 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ALDOAP04075 364 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ANXA2P07355 339 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 TACSTD2P09758 323 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ADAM8P78325 824 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 GRB14Q14449 540 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 RABL3Q5HYI8 236 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 IGDCC3Q8IVU1 814 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 RAVER1Q8IY67 606 aaKnown RBP17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 THAP6Q8TBB0 222 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 ZFP3Q96NJ6 502 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 MYH10P35580 1976 aa17.03■□□□□ 0.32
PCDHA13-201ENST00000289272 LAMP2P13473 410 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC15A3Q8IY34 581 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 OR7D4Q8NG98 312 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 CMTM7Q96FZ5 175 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 MSANTD3Q96H12 275 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 XYLT2Q9H1B5 865 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 ENAMQ9NRM1 1142 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 CDC14AQ9UNH5 594 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 NUP98P52948 1817 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 A0A1B0GVI7 797 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 IL3P08700 152 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 ZNF81P51508 661 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 UFM1P61960 85 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 KEAP1Q14145 624 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 CGB2Q6NT52 195 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 UBE2J2Q8N2K1 259 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 LRCH3Q96II8 777 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 ZNF285Q96NJ3 590 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 MRTO4Q9UKD2 239 aaKnown RBP17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 MRPS33Q9Y291 106 aaKnown RBP17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 CPQQ9Y646 472 aa17.02■□□□□ 0.32
PCDHA13-201ENST00000289272 SLC38A8A6NNN8 435 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 TP73O15350 636 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 KCNE1P15382 129 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 NFKB2Q00653 900 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 CHST9Q7L1S5 443 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 MYH7P12883 1935 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
PCDHA13-201ENST00000289272 ZNF432O94892 652 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms