RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CASP9P55211 416 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 DMPKQ09013 629 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 RIPK1Q13546 671 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 FLOT2Q14254 428 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 NFATC4Q14934 902 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 TLR1Q15399 786 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 MAPRE2Q15555 327 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 RPE65Q16518 533 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 HKDC1Q2TB90 917 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 WASHC2DQ5SRD0 308 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 NOXRED1Q6NXP6 359 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 NET1Q7Z628 596 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 TMEM145Q8NBT3 493 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 WDR48Q8TAF3 677 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 NECAB3Q96P71 396 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 SGPP1Q9BX95 441 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 SLC29A3Q9BZD2 475 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 LTB4R2Q9NPC1 389 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 CMTM6Q9NX76 183 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 USP36Q9P275 1121 aaKnown RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 MUTYHQ9UIF7 546 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 SCML1Q9UN30 329 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 FANCMQ8IYD8 2048 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 ASXL3Q9C0F0 2248 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 A0A1W2PPV9 198 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 PRAMEF10O60809 474 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 TPPPO94811 219 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 SRP54P61011 504 aaKnown RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 NAA20P61599 178 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 DMWDQ09019 674 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 MTAPQ13126 283 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 CACHD1Q5VU97 1274 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 ZFAND4Q86XD8 727 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 MAGEC3Q8TD91 643 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 WDR92Q96MX6 357 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 INPP5KQ9BT40 448 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 PFDN4Q9NQP4 134 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 ZNF624Q9P2J8 865 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-201ENST00000282841 VPS29Q9UBQ0 182 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 BTBD3Q9Y2F9 522 aa10.57□□□□□ -0.72
GGPS1-201ENST00000282841 LCMT2O60294 686 aaKnown RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 DFNA5O60443 496 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 C1GALT1C1LP0DN25 315 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MTHFD1P11586 935 aaKnown RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 AMD1P17707 334 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SLC6A2P23975 617 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 HTR1BP28222 390 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ATP4BP51164 291 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MC1RQ01726 317 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 UAP1L1Q3KQV9 507 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 PDCD4Q53EL6 469 aaKnown RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 C6orf163Q5TEZ5 329 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 LIPJQ5W064 366 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 GRHL2Q6ISB3 625 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MED27Q6P2C8 311 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 NXPE4Q6UWF7 544 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 UNC5DQ6UXZ4 953 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SPATA24Q86W54 205 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SLC15A3Q8IY34 581 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ANKRD53Q8N9V6 530 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 IKZF5Q9H5V7 419 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SYNPO2LQ9H987 977 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 FBRSQ9HAH7 460 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SPAG4Q9NPE6 437 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 WSB2Q9NYS7 404 aaPredicted RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ICKQ9UPZ9 632 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 GNG14A0A1W2PPG7 69 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MAN2B1O00754 1011 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 MAP3K13O43283 966 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ANP32DO95626 131 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 THEGLP0DJG4 465 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ME2P23368 584 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 AKT2P31751 481 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 PTDSS1P48651 473 aaKnown RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ZP2Q05996 745 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 TMED1Q13445 227 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 TRMT5Q32P41 509 aaKnown RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 OR4F3Q6IEY1 312 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SYT12Q8IV01 421 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 TMEFF1Q8IYR6 380 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 FBXL6Q8N531 539 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 OR10G6Q8NH81 332 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 TBC1D17Q9HA65 648 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ACSL5Q9ULC5 683 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.56□□□□□ -0.72
GGPS1-201ENST00000282841 SCN2AQ99250 2005 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 PLXND1Q9Y4D7 1925 aa10.56□□□□□ -0.72
GGPS1-201ENST00000282841 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 A0A1W2PPC1 479 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 FAM234BA2RU67 622 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 WASHC1A8K0Z3 465 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 BOLA2-SMG1P6H3BVE0 249 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 YY2O15391 372 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 CD6P30203 668 aa10.55□□□□□ -0.72
GGPS1-201ENST00000282841 CDKN2CP42773 168 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms