RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 GAB4Q2WGN9 574 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 HNRNPA1L2Q32P51 320 aaKnown RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 ZIK1Q3SY52 487 aaPredicted RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 TCEAL5Q5H9L2 206 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 TMEM240Q5SV17 173 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 PIWIL3Q7Z3Z3 882 aaKnown RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 LAS2Q8IYD9 372 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 LRRC56Q8IYG6 542 aaPredicted RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 SYNPOQ8N3V7 929 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF555Q8NEP9 628 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 HUS1BQ8NHY5 278 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 PUM2Q8TB72 1066 aaKnown RBP eCLIP7□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF480Q8WV37 535 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 ING5Q8WYH8 240 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 NEIL2Q969S2 332 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 GFM2Q969S9 779 aaKnown RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 RSPRY1Q96DX4 576 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 MED8Q96G25 268 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF514Q96K75 400 aaPredicted RBP7□□□□□ -1.29
SPARCL1-201ENST00000282470 CXorf21Q9HAI6 301 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 SMURF2Q9HAU4 748 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 TMEM9Q9P0T7 183 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 RPS6KA6Q9UK32 745 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 CORO2BQ9UQ03 480 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 TSC22D4Q9Y3Q8 395 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 KCNE2Q9Y6J6 123 aa7□□□□□ -1.29
SPARCL1-201ENST00000282470 TRANK1O15050 2925 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ALPK3Q96L96 1907 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 EDDM13A0A1B0GTR0 161 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 C17orf113A0A1B0GUU1 675 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 LINC01553A4QN01 128 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 GNGT2O14610 69 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 YY2O15391 372 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 TLL1O43897 1013 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 LAMP1P11279 417 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 PPIBP23284 216 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 RYKP34925 604 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 HPCAL1P37235 193 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 TBPL1P62380 186 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 VAC14Q08AM6 782 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 KCNAB2Q13303 367 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 C9orf64Q5T6V5 341 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ANXA8L1Q5VT79 327 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF691Q5VV52 312 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 MED27Q6P2C8 311 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 PSRC1Q6PGN9 363 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 FBXO46Q6PJ61 603 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 SPESP1Q6UW49 350 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 CLVS1Q8IUQ0 354 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ZDHHC21Q8IVQ6 265 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 C1orf52Q8N6N3 182 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 CHDHQ8NE62 594 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 OR13F1Q8NGS4 319 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 FOXJ1Q92949 421 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF566Q969W8 418 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 NXPE3Q969Y0 559 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 NUS1Q96E22 293 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 WRAP53Q9BUR4 548 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 EFCAB11Q9BUY7 163 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 DUSP26Q9BV47 211 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 POLR1BQ9H9Y6 1135 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 TM9SF3Q9HD45 589 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 VNN3Q9NY84 501 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 DPP7Q9UHL4 492 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ATP6V1HQ9UI12 483 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 MRPS23Q9Y3D9 190 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 NAALAD2Q9Y3Q0 740 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 PCDHGA8Q9Y5G5 932 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ATG2AQ2TAZ0 1938 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 GABRR3A8MPY1 467 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 PRRT4C9JH25 899 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 KPNA3O00505 521 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 RNASET2O00584 256 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 NOBOXO60393 691 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ABCB7O75027 752 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 SEC14L2O76054 403 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 C1QCP02747 245 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ANXA4P09525 319 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 TIA1P31483 386 aaKnown RBP eCLIP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 KDELR2P33947 212 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 POLR2IP36954 125 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 RPS6KA3P51812 740 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 NUP107P57740 925 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ISL1P61371 349 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 TUBA3CQ13748 450 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ELAVL3Q14576 367 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 POM121L1PQ3SYA9 428 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 BROXQ5VW32 411 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 XAF1Q6GPH4 301 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ADNP2Q6IQ32 1131 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 CAPN13Q6MZZ7 669 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ZCCHC8Q6NZY4 707 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 EIF3MQ7L2H7 374 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 DCP2Q8IU60 420 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 CLECL1Q8IZS7 167 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ZNF366Q8N895 744 aa6.99□□□□□ -1.29
SPARCL1-201ENST00000282470 ARL10Q8N8L6 244 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms