RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KCNE1BA0A087WTH5 132 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 OPN1SWP03999 348 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 GPX2P18283 190 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 CTGFP29279 349 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 S100A5P33763 92 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 UGT2B10P36537 528 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 TRPC1P48995 793 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 SH3KBP1Q96B97 665 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 BBS2Q9BXC9 721 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 ROGDIQ9GZN7 287 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 RDH14Q9HBH5 336 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 PRM3Q9NNZ6 103 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 ZNF840PA6NDX5 716 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 SAGE2PA6NJ88 616 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 PTHP01270 115 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 LAMP1P11279 417 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 CCR7P32248 378 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 HECTD3Q5T447 861 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 GDPD3Q7L5L3 318 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 SLC46A3Q7Z3Q1 461 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 TMEM173Q86WV6 379 aaPredicted RBP26.59■■□□□ 1.85
CBX4-201ENST00000269397 ANKHQ9HCJ1 492 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 GFRA2O00451 464 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 SCN2BO60939 215 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 EOMESO95936 686 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 CASP3P42574 277 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 KCNJ10P78508 379 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 MBTPS1Q14703 1052 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 INO80DQ53TQ3 878 aaPredicted RBP26.59■■□□□ 1.85
CBX4-201ENST00000269397 MACC1Q6ZN28 852 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 RAVER1Q8IY67 606 aaKnown RBP26.59■■□□□ 1.85
CBX4-201ENST00000269397 DNAJC22Q8N4W6 341 aa26.59■■□□□ 1.85
CBX4-201ENST00000269397 POP5Q969H6 163 aaKnown RBP26.59■■□□□ 1.85
CBX4-201ENST00000269397 TP63Q9H3D4 680 aaPredicted RBP26.59■■□□□ 1.85
CBX4-201ENST00000269397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 CHST9Q7L1S5 443 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 NXPE1Q8N323 547 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 SPPL2AQ8TCT8 520 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 MTERF1Q99551 399 aaKnown RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 TPT1P8Q9HAU6 139 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 SLC6A14Q9UN76 642 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 C2orf78A6NCI8 922 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 MRPS14O60783 128 aaKnown RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 IGHA2P01877 340 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 RPLP0P05388 317 aaKnown RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 MAPK1P28482 360 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 CSKP41240 450 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 MTA1Q13330 715 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 TBCEQ15813 527 aaPredicted RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.58■■□□□ 1.85
CBX4-201ENST00000269397 SLC5A8Q8N695 610 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 UTP15Q8TED0 518 aaKnown RBP26.58■■□□□ 1.85
CBX4-201ENST00000269397 CLSTN3Q9BQT9 956 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 C14orf119Q9NWQ9 140 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 FZD4Q9ULV1 537 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 LAMA3Q16787 3333 aa26.58■■□□□ 1.85
CBX4-201ENST00000269397 CELF2O95319 508 aaKnown RBP26.57■■□□□ 1.84
CBX4-201ENST00000269397 TRBC1P01850 177 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 CDK1P06493 297 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 OR1E2P47887 323 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 COPZ1P61923 177 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 CYP27C1Q4G0S4 372 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 PNCKQ6P2M8 343 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 RFLNAQ6ZTI6 216 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 VRK3Q8IV63 474 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 GPR26Q8NDV2 337 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 FCGR1BQ92637 280 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 HTATIP2Q9BUP3 242 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 TPK1Q9H3S4 243 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 IFT52Q9Y366 437 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 SNX8Q9Y5X2 465 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 CLCA1A8K7I4 914 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 CYBAP13498 195 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 MTAPQ13126 283 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 TRIM71Q2Q1W2 868 aaKnown RBP26.57■■□□□ 1.84
CBX4-201ENST00000269397 ARMCX4Q5H9R4 360 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 FRG2Q64ET8 278 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 MYDGFQ969H8 173 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 FRG2BQ96QU4 278 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 SPASTQ9UBP0 616 aa26.57■■□□□ 1.84
CBX4-201ENST00000269397 TRBV5-4A0A0C4DH59 114 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 ADORA3P0DMS8 318 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 ACPPP15309 386 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 PRPS1L1P21108 318 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 RGMBQ6NW40 437 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 TSEN54Q7Z6J9 526 aaKnown RBP26.56■■□□□ 1.84
CBX4-201ENST00000269397 ZNF486Q96H40 463 aaPredicted RBP26.56■■□□□ 1.84
CBX4-201ENST00000269397 HHIPQ96QV1 700 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 RMI1Q9H9A7 625 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 MARCH5Q9NX47 278 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 FAM8A1Q9UBU6 413 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 UGT2A1Q9Y4X1 527 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 SUV39H1O43463 412 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 DYRK3O43781 588 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 POU2F1P14859 743 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 AOAHP28039 575 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 GGT2P36268 569 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 ERICH5Q6P6B1 374 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 TUBA3EQ6PEY2 450 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 STX19Q8N4C7 294 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms