RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 THEMIS2Q5TEJ8 643 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 HIST2H2AA3Q6FI13 130 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 DUS1LQ6P1R4 473 aaKnown RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 USP30Q70CQ3 517 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 CALHM3Q86XJ0 350 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D21Q8IYX1 336 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 TMEM132CQ8N3T6 1108 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 C2orf73Q8N5S3 287 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 ZNF740Q8NDX6 193 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 SIPA1Q96FS4 1042 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 APOOQ9BUR5 198 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 C8orf33Q9H7E9 229 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-201ENST00000269318 GORASP2Q9H8Y8 452 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 FZD3Q9NPG1 666 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 SPATA7Q9P0W8 599 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 CD207Q9UJ71 328 aa16.01■□□□□ 0.15
CCDC40-201ENST00000269318 C2CD4DB7Z1M9 353 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 GSNP06396 782 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ANXA4P09525 319 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 PIK3CBP42338 1070 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ASMTP46597 345 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 MLF2Q15773 248 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 PYCR3Q53H96 274 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ARMCX6Q7L4S7 300 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 PHACTR4Q8IZ21 702 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 C10orf111Q8N326 155 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 GALNT4Q8N4A0 578 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 GPR156Q8NFN8 814 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ASB12Q8WXK4 309 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 NELL1Q92832 810 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 MIEF2Q96C03 454 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 AURKBQ96GD4 344 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 SCARF2Q96GP6 870 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 MRGPRX1Q96LB2 322 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ZNF597Q96LX8 424 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 GBP5Q96PP8 586 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 INSM2Q96T92 566 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 VCXQ9H320 206 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 INVSQ9Y283 1065 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 BTBD3Q9Y2F9 522 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 NUMA1Q14980 2115 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 RFXANKO14593 260 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 SCAMP2O15127 329 aaKnown RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 LATO43561 262 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 LYNP07948 512 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ANXA6P08133 673 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 UBTFL6P0CB48 400 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 PIM1P11309 404 aaPredicted RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 COX7A2P14406 83 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 FASP25445 335 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 HSPA13P48723 471 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 TRPC1P48995 793 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 POLE2P56282 527 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 PRKCQQ04759 706 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 DUOXA1Q1HG43 343 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 VN1R5Q7Z5H4 357 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 CAMKMTQ7Z624 323 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 SLC44A3Q8N4M1 653 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 TNIP2Q8NFZ5 429 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 PUM2Q8TB72 1066 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC40-201ENST00000269318 STARD8Q92502 1023 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 UBE2E3Q969T4 207 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 SLC29A1Q99808 456 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 CIB1Q99828 191 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 KCNK12Q9HB15 430 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 FAM120CQ9NX05 1096 aaKnown RBP16■□□□□ 0.15
CCDC40-201ENST00000269318 SUFUQ9UMX1 484 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 ERVK-11Q9UQG0 969 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 KCNK6Q9Y257 313 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 PLEKHM1Q9Y4G2 1056 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 AK5Q9Y6K8 562 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 EYSQ5T1H1 3165 aa16■□□□□ 0.15
CCDC40-201ENST00000269318 CROCCQ5TZA2 2017 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 A0A1W2PPV9 198 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 ELOVL7A1L3X0 281 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 C7orf72A4D263 438 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 FAM220BPB1ANY3 271 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 H3BQ06 376 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-201ENST00000269318 YY2O15391 372 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 SLC31A1O15431 190 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 PCDH7O60245 1069 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 TPST1O60507 370 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 LAMP1P11279 417 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 FCGR1AP12314 374 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 TMEM154Q6P9G4 183 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 TMIGD1Q6UXZ0 262 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 GCNT7Q6ZNI0 430 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 COMMD6Q7Z4G1 85 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 MARVELD2Q8N4S9 558 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 OR52E4Q8NGH9 312 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 DNASE1L2Q92874 299 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 CENPNQ96H22 339 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-201ENST00000269318 C12orf66Q96MD2 445 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 ACAT2Q9BWD1 397 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 CD93Q9NPY3 652 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 WASH6PQ9NQA3 447 aa15.99■□□□□ 0.15
CCDC40-201ENST00000269318 TAC3Q9UHF0 121 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms