RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PKDCCQ504Y2 493 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 CPXM2Q8N436 756 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 RHEBL1Q8TAI7 183 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 ZNF382Q96SR6 550 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 RACGAP1Q9H0H5 632 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 MYO7AQ13402 2215 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 EME2A4GXA9 379 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 LATO43561 262 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 GIMD1P0DJR0 217 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 IL4RP24394 825 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 OXTRP30559 389 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 RPL5P46777 297 aaKnown RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 VSX2P58304 361 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 EIPR1Q53HC9 387 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 FAM92BQ6ZTR7 304 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 METTL27Q8N6F8 245 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 RPLP0P6Q8NHW5 317 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 MTMR10Q9NXD2 777 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 RIIAD1A6NNX1 92 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 C1GALT1C1LP0DN25 315 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 RAP2AP10114 183 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 PEX2P28328 305 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 KIAA1161Q6NSJ0 714 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 ARHGAP12Q8IWW6 846 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 MRPS26Q9BYN8 205 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 C8orf4Q9NR00 106 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 SLC16A5O15375 505 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 GPR107Q5VW38 600 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 LINC01465Q8N7H1 131 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 GPATCH1Q9BRR8 931 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 OR5K4A6NMS3 321 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 BCHEP06276 602 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 DRD1P21728 446 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 FDXRP22570 491 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 PXNP49023 591 aaPredicted RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 CDKN1CP49918 316 aaPredicted RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 MPP2Q14168 576 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 NFE2L1Q14494 772 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 PLEKHG4BQ96PX9 1271 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 FADS2O95864 444 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 MYOGP15173 224 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 SOX9P48436 509 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 DIO3P55073 304 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 TBPL1P62380 186 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 RIPK1Q13546 671 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 HNRNPA1L2Q32P51 320 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 TMEM126BQ8IUX1 230 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 NOL6Q9H6R4 1146 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 ZSCAN32Q9NX65 697 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 THUMPD1Q9NXG2 353 aaKnown RBP13.29□□□□□ -0.28
NPC1-201ENST00000269228 STMN3Q9NZ72 180 aa13.29□□□□□ -0.28
NPC1-201ENST00000269228 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
NPC1-201ENST00000269228 ASGR2P07307 311 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 AHCYP23526 432 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 GRK6P43250 576 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 SLC6A11P48066 632 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ARMC3Q5W041 872 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 TRNP1Q6NT89 227 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 CYS1Q717R9 158 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ZHX1-C8orf76Q96EF9 292 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ART5Q96L15 291 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ZNF570Q96NI8 536 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 RBCK1Q9BYM8 510 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 SUSD2Q9UGT4 822 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ZCWPW2A0A1B0GU75 182 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 E7ENX8 843 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 XRCC1P18887 633 aaPredicted RBP13.28□□□□□ -0.28
NPC1-201ENST00000269228 ATP5A1P25705 553 aaKnown RBP13.28□□□□□ -0.28
NPC1-201ENST00000269228 PPP1R3AQ16821 1122 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 C6orf136Q5SQH8 315 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 SLC29A4Q7RTT9 530 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 OR4K1Q8NGD4 311 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 ZDHHC12Q96GR4 267 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 TMEM74Q96NL1 305 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 KCNH6Q9H252 994 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 MVB12BQ9H7P6 319 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 TPT1P8Q9HAU6 139 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 IL26Q9NPH9 171 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 HSFX1Q9UBD0 423 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 A0A1W2PP18 115 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 NOBOXO60393 691 aa13.28□□□□□ -0.28
NPC1-201ENST00000269228 HCN1O60741 890 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms