RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KIF18BQ86Y91 864 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 HIPK1Q86Z02 1210 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SVOPLQ8N434 492 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ZNF548Q8NEK5 533 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 KBTBD8Q8NFY9 601 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 WDR48Q8TAF3 677 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 WNT8BQ93098 351 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SPACA7Q96KW9 195 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ACTL8Q9H568 366 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 AIG1Q9NVV5 245 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 TNFRSF10DQ9UBN6 386 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 KLHL21Q9UJP4 597 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SNX10Q9Y5X0 201 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 LRRTM2O43300 516 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 PAHP00439 452 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 HLA-DMAP28067 261 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 NOS2P35228 1153 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 GNPDA1P46926 289 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 CCT3P49368 545 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 CLCN4P51793 760 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SLC6A3Q01959 620 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ASAH1Q13510 395 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SSX1Q16384 188 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 TSTQ16762 297 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 PFKFB4Q16877 469 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 LEXMQ3ZCV2 418 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 MPPE1Q53F39 396 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 KANK2Q63ZY3 851 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ST13P5Q8NFI4 369 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 OR6M1Q8NGM8 313 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 OR8K3Q8NH51 312 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 C11orf84Q9BUA3 381 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 SNTG1Q9NSN8 517 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 MALT1Q9UDY8 824 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 LEF1Q9UJU2 399 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 ACAD8Q9UKU7 415 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 NDRG2Q9UN36 371 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 TNFSF13BQ9Y275 285 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 SIP14410 1827 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 LOC102723532A0A0G2JNH3 316 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 SERPINA1P01009 418 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 TPMTP51580 245 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 RPP38P78345 283 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 C2orf80Q0P641 193 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 OR4D1Q15615 310 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 GLYR1Q49A26 553 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 NOTUMQ6P988 496 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 TMPRSS11AQ6ZMR5 421 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 OR2T12Q8NG77 320 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 DNAJA4Q8WW22 397 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 ZBED6CLQ96FA7 236 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 C12orf57Q99622 126 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 CCM2Q9BSQ5 444 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ABCB9Q9NP78 766 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 IKZF3Q9UKT9 509 aa8.51□□□□□ -1.05
VAPB-201ENST00000265619 ZNF490Q9ULM2 529 aaPredicted RBP8.51□□□□□ -1.05
VAPB-201ENST00000265619 IGKV6-21A0A0C4DH24 114 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MRPS14O60783 128 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 IFNA16P05015 189 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ERCC2P18074 760 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CD52P31358 61 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MAN2A2P49641 1150 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 AGFG1P52594 562 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 KCNC3Q14003 757 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FAM131AQ6UXB0 335 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CHMP1BQ7LBR1 199 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MSRB3Q8IXL7 192 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 SOCS4Q8WXH5 440 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 SLC9A6Q92581 669 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FAM162AQ96A26 154 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MTFMTQ96DP5 389 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 PPP1R2P1Q96PQ5 205 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 KCNC2Q96PR1 638 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 SLC6A17Q9H1V8 727 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MGAT4AQ9UM21 535 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 PCDHGA6Q9Y5G7 932 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 LOC285556D6RIA3 1793 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 A0A0B4J203 849 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 GFRA2O00451 464 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MUSKO15146 869 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 GSTA4O15217 222 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 OR1I1O60431 355 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 F2P00734 622 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CHRM5P08912 532 aaPredicted RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 LTA4HP09960 611 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 LCP1P13796 627 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CXCR4P61073 352 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 HERVK_113P63132 956 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ERVK-8P63133 956 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 PSPHP78330 225 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 QPRTQ15274 297 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms