RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 REXO4Q9GZR2 422 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 RMI1Q9H9A7 625 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 NANOGQ9H9S0 305 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 DLGAP4Q9Y2H0 992 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 DOCK8Q8NF50 2099 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 A0A0J9YVX5 310 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 PLRG1O43660 514 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 PTX3P26022 381 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 AQP1P29972 269 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 MANFP55145 182 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 TAS2R50P59544 299 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 SRSF11Q05519 484 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 FAM98BQ52LJ0 330 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 SPIN4Q56A73 249 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 OTUD3Q5T2D3 398 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 ICE2Q659A1 982 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 FUNDC1Q8IVP5 155 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 ZNF547Q8IVP9 402 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 PQLC1Q8N2U9 271 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 OR7A2PQ8NGA2 310 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 OR4A15Q8NGL6 344 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 SETD7Q8WTS6 366 aaKnown RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 RERGQ96A58 199 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 TEX37Q96LM6 180 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 DPH7Q9BTV6 452 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 ZDHHC5Q9C0B5 715 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 C6orf106Q9H6K1 298 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 ANAPC2Q9UJX6 822 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 FZD4Q9ULV1 537 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 AK5Q9Y6K8 562 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 PTPRZ1P23471 2315 aaPredicted RBP8.99□□□□□ -0.97
SSR3-201ENST00000265044 SPAG17Q6Q759 2223 aa8.99□□□□□ -0.97
SSR3-201ENST00000265044 KLHL33A6NCF5 533 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 PRORSD1PA6NEY8 169 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 NDUFS4O43181 175 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 JUNDP17535 347 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GM2AP17900 193 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GSK3BP49841 420 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 RAB8AP61006 207 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SRP54P61011 504 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 IRX1P78414 480 aaPredicted RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 METRNLQ641Q3 311 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GRHL2Q6ISB3 625 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SLC15A3Q8IY34 581 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 OR4K1Q8NGD4 311 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ZCCHC10Q8TBK6 192 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ASB9Q96DX5 294 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 TPD52L3Q96J77 140 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 MSLNLQ96KJ4 702 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 F2RL3Q96RI0 385 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SLC7A5P2Q9GIP4 190 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CD93Q9NPY3 652 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SOHLH2Q9NX45 425 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SLC13A4Q9UKG4 626 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 FBXW2Q9UKT8 454 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 MAPRE3Q9UPY8 281 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ORC6Q9Y5N6 252 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CROCCQ5TZA2 2017 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GPR89AB7ZAQ6 455 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 PRAMEF26H0Y7S4 382 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 FBP2O00757 339 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ERI3O43414 337 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 DFNA5O60443 496 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SEC24DO94855 1032 aaPredicted RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 GPR89BP0CG08 455 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GABRG2P18507 467 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CDH3P22223 829 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 TACR1P25103 407 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 RGS1Q08116 209 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 GRIK2Q13002 908 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 PWP1Q13610 501 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 TP53BP2Q13625 1128 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 NFATC4Q14934 902 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ANXA8L1Q5VT79 327 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 TRIM40Q6P9F5 258 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 LPCAT2Q7L5N7 544 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 AMIGO1Q86WK6 493 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CHCHD4Q8N4Q1 142 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 OR52E1Q8NGJ3 308 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 OR5K2Q8NHB8 316 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 RNF217Q8TC41 542 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 UBTD2Q8WUN7 234 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 MVB12BQ9H7P6 319 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 SLAMF8Q9P0V8 285 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 APOBEC3BQ9UH17 382 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 FAM149AA5PLN7 773 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 ZNF217O75362 1048 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CCNDBP1O95273 360 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 UBTFL6P0CB48 400 aaPredicted RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 IL9P15248 144 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 NPPBP16860 134 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 RPL3P39023 403 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 MS4A2Q01362 244 aa8.98□□□□□ -0.97
SSR3-201ENST00000265044 CSTF3Q12996 717 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 USP39Q53GS9 565 aaKnown RBP8.98□□□□□ -0.97
SSR3-201ENST00000265044 SNAP47Q5SQN1 464 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms