RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 PTGR2Q8N8N7 351 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 CT55Q8WUE5 264 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC5A11Q8WWX8 675 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 ATL1Q8WXF7 558 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 ISL2Q96A47 359 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCDC77Q9BR77 488 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 CENPHQ9H3R5 247 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 GPN2Q9H9Y4 310 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 TXLNGQ9NUQ3 528 aa6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 RUVBL1Q9Y265 456 aaKnown RBP6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMEM184BQ9Y519 407 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF860A6NHJ4 632 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 H3BMH7 237 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 MEN1O00255 615 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR1F1O43749 312 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 LCMT2O60294 686 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 PRAMEF4O60810 478 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 STK16O75716 305 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCNDBP1O95273 360 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 TCN2P20062 427 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CNTFP26441 200 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 STAT5AP42229 794 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR1D4P47884 311 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 PRAMEF9Q5VWM5 478 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 LCTLQ6UWM7 567 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 VN1R4Q7Z5H5 301 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CSNK1A1LQ8N752 337 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 KCT2Q8NC54 265 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 PDPRQ8NCN5 879 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CAVIN3Q969G5 261 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZUFSPQ96AP4 578 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CABS1Q96KC9 395 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZPBPQ9BS86 351 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 LHX9Q9NQ69 397 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 NUDT4Q9NZJ9 180 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMEM216Q9P0N5 145 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 RAB21Q9UL25 225 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 NOVA2Q9UNW9 492 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 DYRK1BQ9Y463 629 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 A0A0G2JN53 185 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 NDUFS4O43181 175 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 EFSO43281 561 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CDH16O75309 829 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 MT-ND3P03897 115 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 EZRP15311 586 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 IL1RNP18510 177 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 PIK3CGP48736 1102 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 HNMTP50135 292 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CDC16Q13042 620 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLBPQ14493 270 aaKnown RBP eCLIP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 ACAP2Q15057 778 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZC3H12BQ5HYM0 836 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 LGSNQ5TDP6 509 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 MLIPQ5VWP3 458 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCDC81Q6ZN84 652 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 SRRM1Q8IYB3 904 aaKnown RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 RNF175Q8N4F7 328 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCT6BQ92526 530 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 ANKRD7Q92527 254 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 RERGQ96A58 199 aaPredicted RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 C10orf90Q96M02 699 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CDK15Q96Q40 435 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR2A5Q96R48 311 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCNL2Q96S94 520 aaPredicted RBP6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 NDC1Q9BTX1 674 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 SPRY4Q9C004 299 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CUTCQ9NTM9 273 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 DNAJC11Q9NVH1 559 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 CTSFQ9UBX1 484 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 PCDHGA4Q9Y5G9 962 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 KCNE2Q9Y6J6 123 aa6.92□□□□□ -1.3
DEPDC1B-201ENST00000265036 RELNP78509 3460 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 A0A087WV48 116 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 TARM1B6A8C7 271 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 MAP2K7O14733 419 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 SPAG7O75391 227 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 SBK3P0C264 359 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 CREB1P16220 341 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 KRT4P19013 534 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 EPORP19235 508 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 CD22P20273 847 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 ITGAXP20702 1163 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCND1P24385 295 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 EEF1DP29692 281 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 RORAP35398 523 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCR8P51685 355 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 ABATP80404 500 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 CDKL1Q00532 357 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 DDX39BQ13838 428 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 ERV3-1Q14264 604 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 RBBP5Q15291 538 aaKnown RBP6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 PDK4Q16654 411 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 SYT16Q17RD7 645 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 KRT71Q3SY84 523 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
DEPDC1B-201ENST00000265036 SULT1C3Q6IMI6 304 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms