RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TMEM145Q8NBT3 493 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 SLCO3A1Q9UIG8 710 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RIIAD1A6NNX1 92 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 BCKDHAP12694 445 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 NRIP1P48552 1158 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TAF13Q15543 124 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 OR52B6Q8NGF0 335 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RDH12Q96NR8 316 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TVP23BQ9NYZ1 205 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 NDRG2Q9UN36 371 aaKnown RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 PHF24Q9UPV7 400 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RPL36Q9Y3U8 105 aaKnown RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 AURKAO14965 403 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 FGF4P08620 206 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 PRSS56P0CW18 603 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 STAT5AP42229 794 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 XKR4Q5GH76 650 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 FAM131AQ6UXB0 335 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 TGM5O43548 720 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 HSD3B1P14060 373 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 SYN1P17600 705 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 HSD3B2P26439 372 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 ARSFP54793 590 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 PPP1R8Q12972 351 aaKnown RBP16.22■□□□□ 0.19
PHRF1-201ENST00000264555 ERN2Q76MJ5 926 aaKnown RBP16.22■□□□□ 0.19
PHRF1-201ENST00000264555 NFKBIDQ8NI38 313 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 SNX7Q9UNH6 387 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 H3BSA7 217 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 KLHL22Q53GT1 634 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■■■□ 22.9
PHRF1-201ENST00000264555 KIAA0319Q5VV43 1072 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 CADM2Q8N3J6 435 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 SCRN2Q96FV2 425 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 RACGAP1Q9H0H5 632 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 PCDHB11Q9Y5F2 797 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 PEX16Q9Y5Y5 336 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 PGRMC2O15173 223 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 NDUFS4O43181 175 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 LDB2O43679 373 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 SNAP47Q5SQN1 464 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 COQ6Q9Y2Z9 468 aa16.22■□□□□ 0.19
PHRF1-201ENST00000264555 CAPN14A8MX76 684 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 SCN2BO60939 215 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 AGR2O95994 175 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 SUZ12Q15022 739 aaKnown RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 ZSWIM7Q19AV6 140 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 TMEM44Q2T9K0 475 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 EGFLAMQ63HQ2 1017 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 SUSD1Q6UWL2 747 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 CEACAM20Q6UY09 585 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF534Q76KX8 674 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 IZUMO1Q8IYV9 350 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 NT5C3BQ969T7 300 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 PTERQ96BW5 349 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 GSTO2Q9H4Y5 243 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 REEP4Q9H6H4 257 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 UTS2RQ9UKP6 389 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 LOC285095A0A1B0GVY8 99 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 DFNA5O60443 496 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 ADH1BP00325 375 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 C7P10643 843 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 JUPP14923 745 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 CD70P32970 193 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 MVKQ03426 396 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 USP30Q70CQ3 517 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 FBXL20Q96IG2 436 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 KCNC2Q96PR1 638 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 H0YJX3 145 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 AGRPO00253 132 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 SLC22A1O15245 554 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 BCHEP06276 602 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 PRKAR1AP10644 381 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 RPS3P23396 243 aaKnown RBP eCLIP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 KHDRBS2Q5VWX1 349 aaKnown RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 ABHD13Q7L211 337 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 OAFQ86UD1 273 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 TRIM74Q86UV6 250 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 KRTCAP2Q8N6L1 136 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 COX4I2Q96KJ9 171 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 TOR3AQ9H497 397 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 EIF3FO00303 357 aaPredicted RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 MATN4O95460 622 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 C6orf47O95873 294 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 HOXD8P13378 290 aaPredicted RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 IL17CQ9P0M4 197 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 DLGAP4Q9Y2H0 992 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
PHRF1-201ENST00000264555 OAS3Q9Y6K5 1087 aaKnown RBP16.21■□□□□ 0.19
PHRF1-201ENST00000264555 SPINT3P49223 89 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 SLC14A2Q15849 920 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 OGFRL1Q5TC84 451 aaPredicted RBP16.2■□□□□ 0.18
PHRF1-201ENST00000264555 IRAK1BP1Q5VVH5 260 aa16.2■□□□□ 0.18
PHRF1-201ENST00000264555 GALNT7Q86SF2 657 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms