RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FBXO5Q9UKT4 447 aa20■□□□□ 0.79
NEDD8-201ENST00000250495 NEU2Q9Y3R4 380 aa20■□□□□ 0.79
NEDD8-201ENST00000250495 SVILO95425 2214 aa20■□□□□ 0.79
NEDD8-201ENST00000250495 ZGRF1Q86YA3 2104 aa20■□□□□ 0.79
NEDD8-201ENST00000250495 IGHV1-45A0A0A0MS14 117 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 A0A0A6YYC8 382 aaPredicted RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 I3L1I5 382 aaPredicted RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 HAT1O14929 419 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 WFS1O76024 890 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 HAUS5O94927 633 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 BMP10O95393 424 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 F7P08709 466 aaPredicted RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 ICAM2P13598 275 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 MAGEA3P43357 314 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 LRRC8EQ6NSJ5 796 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 FAM180AQ6UWF9 173 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 RIPOR1Q6ZS17 1223 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 ARHGEF39Q8N4T4 335 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 NAT8LQ8N9F0 302 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 GABPB2Q8TAK5 448 aaPredicted RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 CD200R1Q8TD46 325 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 MCOLN3Q8TDD5 553 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 BRIX1Q8TDN6 353 aaKnown RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 GRK7Q8WTQ7 553 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 PSMF1Q92530 271 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 HAS2Q92819 552 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
NEDD8-201ENST00000250495 CACNA1DQ01668 2161 aa19.99■□□□□ 0.79
NEDD8-201ENST00000250495 LOC102723996A0A087X1L8 192 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 FFAR3O14843 346 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 GPR42O15529 346 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 CLDN1O95832 211 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 UQCRHP07919 91 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 IMPA1P29218 277 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 SOX11P35716 441 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 EEF1A2Q05639 463 aaKnown RBP19.98■□□□□ 0.79
NEDD8-201ENST00000250495 PTK6Q13882 451 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 HSP90AA5PQ58FG0 334 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 FAAH2Q6GMR7 532 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 PLD3Q8IV08 490 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 CPNE9Q8IYJ1 553 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 BCORP1Q8N888 145 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.98■□□□□ 0.79
NEDD8-201ENST00000250495 CCDC138Q96M89 665 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 FAM167BQ9BTA0 163 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 AARSD1Q9BTE6 412 aaKnown RBP19.98■□□□□ 0.79
NEDD8-201ENST00000250495 PCBD2Q9H0N5 130 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 CCDC177Q9NQR7 707 aaPredicted RBP19.98■□□□□ 0.79
NEDD8-201ENST00000250495 MKL2Q9ULH7 1088 aa19.98■□□□□ 0.79
NEDD8-201ENST00000250495 MRPS2Q9Y399 296 aaKnown RBP19.98■□□□□ 0.79
NEDD8-201ENST00000250495 UNC79Q9P2D8 2635 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 DIDO1Q9BTC0 2240 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 KCNE1BA0A087WTH5 132 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 TRAV17A0A0B4J275 112 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 H0YIG0 161 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PGRMC1O00264 195 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 P2RX6O15547 441 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 RGS4P49798 205 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PER3P56645 1201 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 RPS15AP62244 130 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 MPP1Q00013 466 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 TMEM205Q6UW68 189 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PIWIL4Q7Z3Z4 852 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PALM2Q8IXS6 379 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PPIL6Q8IXY8 311 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 SIRT6Q8N6T7 355 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 METTL21AQ8WXB1 218 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 THAP11Q96EK4 314 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 ZNF700Q9H0M5 742 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 IARS2Q9NSE4 1012 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 PLA2G3Q9NZ20 509 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 TRMT6Q9UJA5 497 aaKnown RBP19.97■□□□□ 0.79
NEDD8-201ENST00000250495 OSGIN2Q9Y236 505 aa19.97■□□□□ 0.79
NEDD8-201ENST00000250495 E2F3O00716 465 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 ZNF500O60304 480 aaPredicted RBP19.96■□□□□ 0.79
NEDD8-201ENST00000250495 COL8A1P27658 744 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 TNFSF10P50591 281 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 SYT16Q17RD7 645 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 LURAP1LQ8IV03 231 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 ZC3H7AQ8IWR0 971 aaKnown RBP19.96■□□□□ 0.79
NEDD8-201ENST00000250495 AGGF1Q8N302 714 aaeCLIP19.96■□□□□ 0.79
NEDD8-201ENST00000250495 TUBB6Q9BUF5 446 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 OLAHQ9NV23 265 aa19.96■□□□□ 0.79
NEDD8-201ENST00000250495 GOLGA6L10A0A0M3HER8 536 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 LRRTM2O43300 516 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 NSA2O95478 260 aaKnown RBP19.95■□□□□ 0.78
NEDD8-201ENST00000250495 C8GP07360 202 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 C8orf89P0DMQ9 161 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 MYBL2P10244 700 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 FNTAP49354 379 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 MAT1AQ00266 395 aaKnown RBP19.95■□□□□ 0.78
NEDD8-201ENST00000250495 PCOLCEQ15113 449 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 SPNS2Q8IVW8 549 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 CAMKVQ8NCB2 501 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 OR9A4Q8NGU2 314 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 ACTRT1Q8TDG2 376 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 EEF1AKMT1Q8WVE0 214 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 MAGEB10Q96LZ2 347 aaPredicted RBP19.95■□□□□ 0.78
NEDD8-201ENST00000250495 SLX1AQ9BQ83 275 aa19.95■□□□□ 0.78
NEDD8-201ENST00000250495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms