RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 IGFBP7Q16270 282 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 NADK2Q4G0N4 442 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 LCTLQ6UWM7 567 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 TMEM207Q6UWW9 146 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 CDKL2Q92772 493 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 MMABQ96EY8 250 aaPredicted RBP20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 VPS39Q96JC1 886 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 SGPP1Q9BX95 441 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 DRC3Q9H069 523 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 RHOJQ9H4E5 214 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 SEMA3GQ9NS98 782 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 TRPC4Q9UBN4 977 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 IKZF3Q9UKT9 509 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 HS3ST3B1Q9Y662 390 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 SCN3AQ9NY46 2000 aa20.12■□□□□ 0.81
HCFC1R1-201ENST00000248089 A0A0A6YYC8 382 aaPredicted RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 FEZF1A0PJY2 475 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 VSTM2BA6NLU5 285 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 I3L1I5 382 aaPredicted RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 ENO2P09104 434 aaPredicted RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 ZGLP1P0C6A0 271 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 SLC12A2P55011 1212 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 MLLT10P55197 1068 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 CSNK1G2P78368 415 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 KLC1Q07866 573 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 DSG2Q14126 1118 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 VWA2Q5GFL6 755 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 GARNL3Q5VVW2 1013 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 SBSNQ6UWP8 590 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 NKAPQ8N5F7 415 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 FBXL8Q96CD0 374 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 MVB12AQ96EY5 273 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 HAUS8Q9BT25 410 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 MFRPQ9BY79 579 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 ATP13A2Q9NQ11 1180 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 TXNDC16Q9P2K2 825 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 PCDHGB7Q9Y5F8 929 aa20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 PRRC2CQ9Y520 2896 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-201ENST00000248089 TCRBV9S1A1TA0A576 114 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 CXorf49A8MYA2 514 aaPredicted RBP20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 CDC7O00311 574 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 SOCS6O14544 535 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 DPM1O60762 260 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 ITGA3P26006 1051 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 GRK3P35626 688 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 CBLBQ13191 982 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 MYBPC3Q14896 1274 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 NDUFA9Q16795 377 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 VWA5B1Q5TIE3 1220 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 VN1R4Q7Z5H5 301 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 CEP97Q8IW35 865 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 FBXO25Q8TCJ0 367 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 ATL1Q8WXF7 558 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 PDLIM5Q96HC4 596 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 SMAD5Q99717 465 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 MACROD1Q9BQ69 325 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 GPAMQ9HCL2 828 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 LUZP4Q9P127 313 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 C3orf18Q9UK00 162 aa20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 MRPS2Q9Y399 296 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-201ENST00000248089 ALPPP05187 535 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 NPPBP16860 134 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 BCL6P41182 706 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 CAV1Q03135 178 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 AIMP2Q13155 320 aaKnown RBP20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 TRADDQ15628 312 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 PPP1R3AQ16821 1122 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 SYT16Q17RD7 645 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 ZXDCQ2QGD7 858 aaPredicted RBP20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 C8orf74Q6P047 294 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 KIRREL2Q6UWL6 708 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 C3orf62Q6ZUJ4 267 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 FRA10AC1Q70Z53 315 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 ZNF572Q7Z3I7 529 aaPredicted RBP20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 ARHGEF39Q8N4T4 335 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 AMER3Q8N944 861 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 OR56A3Q8NH54 315 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 ZCCHC10Q8TBK6 192 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 NACC2Q96BF6 587 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 EGFL8Q99944 293 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 MESP1Q9BRJ9 268 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 UNKQ9C0B0 810 aaKnown RBP20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 CAB39LQ9H9S4 337 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 PLAAQ9Y263 795 aa20.09■□□□□ 0.81
HCFC1R1-201ENST00000248089 FLNCQ14315 2725 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 ESYT3A0FGR9 886 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 TTLL8A6PVC2 850 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 FOXS1O43638 330 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 SLC26A3P40879 764 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 AVPR1BP47901 424 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 CCR8P51685 355 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 FOXK1P85037 733 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 MAT1AQ00266 395 aaKnown RBP20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 SLC7A5Q01650 507 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 MEF2AQ02078 507 aaPredicted RBP20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 ASPGQ86U10 573 aa20.08■□□□□ 0.81
HCFC1R1-201ENST00000248089 LAPTM4BQ86VI4 370 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms