RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 C11orf24Q96F05 449 aaPredicted RBP20.93■□□□□ 0.94
SH2D3A-201ENST00000245908 METTL2AQ96IZ6 378 aaKnown RBP20.93■□□□□ 0.94
SH2D3A-201ENST00000245908 SPATA7Q9P0W8 599 aa20.93■□□□□ 0.94
SH2D3A-201ENST00000245908 MYO1GB0I1T2 1018 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 E7EQ34 232 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 hCG_2039718K7EN88 272 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 PABPC1P11940 636 aaKnown RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 RXRGP48443 463 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CXCR4P61073 352 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 EMX1Q04741 257 aaPredicted RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 DOC2AQ14183 400 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 GALNT18Q6P9A2 607 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 VTCN1Q7Z7D3 282 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 KLHDC8AQ8IYD2 350 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CLECL1Q8IZS7 167 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 SLC15A4Q8N697 577 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 SCAIQ8N9R8 606 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 STARD8Q92502 1023 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CLP1Q92989 425 aaKnown RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CCDC90BQ9GZT6 254 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 B3GNT3Q9Y2A9 372 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CARNS1A5YM72 827 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 H0YIV9 168 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CPSF4O95639 269 aaKnown RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 HSD3B1P14060 373 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 HSD3B2P26439 372 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 TMED10P49755 219 aaKnown RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 DEFB103AP81534 67 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 ACSM2AQ08AH3 577 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 VEZF1Q14119 521 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 SIM2Q14190 667 aaPredicted RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 ACSM2BQ68CK6 577 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 GRHL2Q6ISB3 625 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 GALNT10Q86SR1 603 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 SYNPOQ8N3V7 929 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 HSH2DQ96JZ2 352 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 MTERF1Q99551 399 aaKnown RBP20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 BCL7BQ9BQE9 202 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 FAM83CQ9BQN1 747 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 DUSP21Q9H596 190 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 CCL26Q9Y258 94 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 TRIM17Q9Y577 477 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 PCDHB11Q9Y5F2 797 aa20.92■□□□□ 0.94
SH2D3A-201ENST00000245908 UPK3BL1B0FP48 263 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 UPK3BL2E5RIL1 263 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 YY2O15391 372 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 XYLBO75191 536 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 JRKO75564 520 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 LAMP1P11279 417 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 HNF4AP41235 474 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 PRMT2P55345 433 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TLE2Q04725 743 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 CTF1Q16619 201 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 PIWIL3Q7Z3Z3 882 aaKnown RBP20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 ZBTB46Q86UZ6 589 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 HORMAD1Q86X24 394 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TRAM1L1Q8N609 369 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 NAT16Q8N8M0 369 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 ATL1Q8WXF7 558 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TIFAQ96CG3 184 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 SPATA9Q9BWV2 254 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TRNAU1APQ9NX07 287 aaKnown RBP20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TPRKBQ9Y3C4 175 aa20.91■□□□□ 0.94
SH2D3A-201ENST00000245908 TMEM202A6NGA9 273 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 SCAMP2O15127 329 aaKnown RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 DIRAS1O95057 198 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 CTSAP10619 480 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 CYP4B1P13584 511 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 CA8P35219 290 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 ITGA1P56199 1179 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 RPS3AP61247 264 aaKnown RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 SLC35A2P78381 396 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 PCDH1Q08174 1060 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 SLC39A5Q6ZMH5 540 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 Q6ZVL8 140 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 DEFB118Q96PH6 123 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 DPH2Q9BQC3 489 aaPredicted RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 DUSP26Q9BV47 211 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 ASPSCR1Q9BZE9 553 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 ZBP1Q9H171 429 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 BRF2Q9HAW0 419 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 PCDH12Q9NPG4 1184 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 PDP1Q9P0J1 537 aaPredicted RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 ERVK-18Q9QC07 812 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 NFKBIL1Q9UBC1 381 aaPredicted RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 GMPPBQ9Y5P6 360 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 CORINQ9Y5Q5 1042 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 NUP214P35658 2090 aaPredicted RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 OR2AG2A6NM03 316 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 NEDD8-MDP1E9PL57 170 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 MYO1DO94832 1006 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 C8AP07357 584 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 ACVR2AP27037 513 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 HOXA9P31269 272 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 FMO3P31513 532 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 DDX39BQ13838 428 aaKnown RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 RGS21Q2M5E4 152 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 HENMT1Q5T8I9 393 aaKnown RBP20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 LAIR1Q6GTX8 287 aa20.9■□□□□ 0.94
SH2D3A-201ENST00000245908 AGTRAPQ6RW13 159 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms