RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 COPZ2Q9P299 210 aa10.04□□□□□ -0.8
SLF2-201ENST00000238961 SLC37A4O43826 429 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 F2RP25116 425 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CLCN4P51793 760 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 XKP51811 444 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RPS3AP61247 264 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 ADAM15Q13444 863 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TUSC3Q13454 348 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 PPA1Q15181 289 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 FTMTQ8N4E7 242 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 OR52E4Q8NGH9 312 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 OR8K3Q8NH51 312 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CNOT9Q92600 299 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 ZNF670Q9BS34 389 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CARS2Q9HA77 564 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 VSX1Q9NZR4 365 aaPredicted RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 TMEM9Q9P0T7 183 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CORO1AP31146 461 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 CRISP3P54108 245 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 SLC1A5Q15758 541 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 UBQLNLQ8IYU4 475 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ZNF681Q96N22 645 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ABRACLQ9P1F3 81 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 B3GALT1Q9Y5Z6 326 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 F8VP50 259 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TSTD3H0UI37 97 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 STK16O75716 305 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 AMY2BP19961 511 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 EPHA1P21709 976 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 PHC1P78364 1004 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ECT2LQ008S8 904 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RPA4Q13156 261 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 DGKZQ13574 1117 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 IFI44LQ53G44 452 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 IL17RCQ8NAC3 791 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ZNF431Q8TF32 576 aaPredicted RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 BARD1Q99728 777 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 CLDND1Q9NY35 253 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 SLC35F4A4IF30 521 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 FTCDNL1E5RQL4 147 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 APOC4-APOC2K7ER74 178 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CDC7O00311 574 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ZNF254O75437 659 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RP2O75695 350 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 SCAF4O95104 1147 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 APOA2P02652 100 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 APOC2P02655 101 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RPL10P27635 214 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 HSPA7P48741 367 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 GLUD2P49448 558 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 PRKD1Q15139 912 aaPredicted RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 STYK1Q6J9G0 422 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 FAM183BPQ6ZVS7 135 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TMEM203Q969S6 136 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 BEX2Q9BXY8 128 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 BEX1Q9HBH7 125 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 NANSQ9NR45 359 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 VWA7Q9Y334 891 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ST14Q9Y5Y6 855 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 MT-ND1P03886 318 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 PEPDP12955 493 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 KDELR1P24390 212 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 CAP1Q01518 475 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RALGPS1Q5JS13 557 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 TMEM214Q6NUQ4 689 aaKnown RBP10.03□□□□□ -0.8
SLF2-201ENST00000238961 OR4K2Q8NGD2 314 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 ACER1Q8TDN7 264 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 KCTD7Q96MP8 289 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 WDR45Q9Y484 360 aa10.03□□□□□ -0.8
SLF2-201ENST00000238961 BBIP1A8MTZ0 92 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 MAGEB17A8MXT2 336 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 SLC1A7O00341 560 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 GMDSO60547 372 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 COQ9O75208 318 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 PTGR1Q14914 329 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 OPA3Q9H6K4 179 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 TNFRSF10DQ9UBN6 386 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 ERVK-19Q9WJR5 959 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 TIMM22Q9Y584 194 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 DUXAA6NLW8 204 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 TGM1P22735 817 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 LCN1P31025 176 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 UGT2B10P36537 528 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 PKDCCQ504Y2 493 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 C6orf141Q5SZD1 244 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 RHBDF2Q6PJF5 856 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 S100A7AQ86SG5 101 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 SLC37A3Q8NCC5 494 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 LRRN4Q8WUT4 740 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 SLC22A18Q96BI1 424 aa10.02□□□□□ -0.8
SLF2-201ENST00000238961 ZNF282Q9UDV7 671 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms