RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CDK6Q00534 326 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TYSND1Q2T9J0 566 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 C11orf91Q3C1V1 193 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TICAM1Q8IUC6 712 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 WDR48Q8TAF3 677 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SUSD6Q92537 303 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TEFMQ96QE5 360 aaKnown RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TTYH2Q9BSA4 534 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SUV39H2Q9H5I1 410 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 GPRC5BQ9NZH0 403 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 GNB5O14775 395 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 ANXA8P13928 327 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SGCGQ13326 291 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 NFATC2Q13469 925 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TUBA3CQ13748 450 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 DUOXA1Q1HG43 343 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TBPL2Q6SJ96 375 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 FAM20CQ8IXL6 584 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 UBE2FQ969M7 185 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 PPP1R14BQ96C90 147 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 MAGEB10Q96LZ2 347 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 ING3Q9NXR8 418 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SCN9AQ15858 1988 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 SLC30A4O14863 429 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 SYN3O14994 580 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 PGRMC2O15173 223 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 DNAJB1P25685 340 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 IFNGR2P38484 337 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 SLC11A1P49279 550 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 MLLT1Q03111 559 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-201ENST00000226574 NPRL3Q12980 569 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 RCAN2Q14206 197 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-201ENST00000226574 VMACQ2NL98 169 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 GPRC6AQ5T6X5 926 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 KANK2Q63ZY3 851 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 FAM86B1Q8N7N1 296 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 L3HYPDHQ96EM0 354 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ZBED3Q96IU2 234 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-201ENST00000226574 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ZDHHC4Q9NPG8 344 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 SLCO3A1Q9UIG8 710 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF232Q9UNY5 417 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 H3BSH0 61 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 COCHO43405 550 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
NFKB1-201ENST00000226574 GADD45AP24522 165 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 PARGQ86W56 976 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ZFP41Q8N8Y5 198 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF675Q8TD23 568 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ACDQ96AP0 544 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 FERD3LQ96RJ6 166 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 PLAGL1Q9UM63 463 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 GPSM3Q9Y4H4 160 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 COL18A1P39060 1754 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 C2orf78A6NCI8 922 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 MUSKO15146 869 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 GMFGO60234 142 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 CXCL14O95715 111 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 EBLN1P0CF75 366 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ARNTP27540 789 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 AVPR1BP47901 424 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 GRB14Q14449 540 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 LIPKQ5VXJ0 399 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 CEACAM20Q6UY09 585 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 RPS6KB2Q9UBS0 482 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 CFL2Q9Y281 166 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
NFKB1-201ENST00000226574 H0YJX3 145 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ETFAP13804 333 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 TIE1P35590 1138 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 HNF1BP35680 557 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 RPL4P36578 427 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 RGS8P57771 180 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CREMQ03060 361 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 GRM2Q14416 872 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 NFE2L1Q14494 772 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 TEAD4Q15561 434 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF517Q6ZMY9 492 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 OTOP2Q7RTS6 562 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 IQCHQ86VS3 1027 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 MDGA1Q8NFP4 955 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 APIPQ96GX9 242 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CCDC3Q9BQI4 270 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms