RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 SLCO6A1Q86UG4 719 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 FUNDC1Q8IVP5 155 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 OR52B6Q8NGF0 335 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 COQ10AQ96MF6 247 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CSF3RQ99062 836 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 KCTD14Q9BQ13 255 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CARS2Q9HA77 564 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 SMURF2Q9HAU4 748 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ERGIC3Q9Y282 383 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 FAM32AQ9Y421 112 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TNPO3Q9Y5L0 923 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CHD5Q8TDI0 1954 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 C2orf16Q68DN1 1984 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 UBFD1O14562 309 aaKnown RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 MTHFD2P13995 350 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 HGFP14210 728 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 SH3BP2P78314 561 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 LCP2Q13094 533 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 SLC13A2Q13183 592 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PYCR3Q53H96 274 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 DHRS4L2Q6PKH6 230 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 GPRIN3Q6ZVF9 776 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 R3HCC1LQ7Z5L2 792 aaKnown RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PHACTR4Q8IZ21 702 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CADM3Q8N126 398 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ANKFN1Q8N957 763 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ATAD3AQ9NVI7 634 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CMTM6Q9NX76 183 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TMEM181Q9P2C4 612 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 SLC22A14Q9Y267 594 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 NDUFAF1Q9Y375 327 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ANKRD36A6QL64 1941 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 A0A1W2PQF6 199 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 MAN2B1O00754 1011 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 GNGT2O14610 69 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CLPXO76031 633 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 MYO1DO94832 1006 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PRKACGP22612 351 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 HK3P52790 923 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ADPRHP54922 357 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TAS2R38P59533 333 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 SMAD2Q15796 467 aaKnown RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 HORMAD1Q86X24 394 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 HID1Q8IV36 788 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CLYBLQ8N0X4 340 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 HCAR2Q8TDS4 363 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CENPNQ96H22 339 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ABCB10Q9NRK6 738 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CCM2LQ9NUG4 571 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CD300AQ9UGN4 299 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PLAGL1Q9UM63 463 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TARM1B6A8C7 271 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PIP5K1BO14986 540 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 NPHS1O60500 1241 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TSPAN12O95859 305 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 LDLRP01130 860 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 BMP2P12643 396 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 AGXTP21549 392 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 AOAHP28039 575 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TPMTP51580 245 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CLCNKAP51800 687 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PPP2CBP62714 309 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PPP2CAP67775 309 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CDK3Q00526 305 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 GTF2H2Q13888 395 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 COL9A2Q14055 689 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PTCHD3Q3KNS1 767 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 TIGD2Q4W5G0 525 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 CYBRD1Q53TN4 286 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 GTF2H2CQ6P1K8 395 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 DNAJC14Q6Y2X3 702 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ABHD11Q8NFV4 315 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ZFP90Q8TF47 636 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 DNASE1L2Q92874 299 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 NRBF2Q96F24 287 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 PARVBQ9HBI1 364 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 NUDT4Q9NZJ9 180 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 ASB1Q9Y576 335 aa11.34□□□□□ -0.59
TNFAIP1-201ENST00000226225 FPGTO14772 594 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 NDUFS2O75306 463 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 RASGRP1O95267 797 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 SLC35G4P0C7Q5 338 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 HTR1BP28222 390 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 HPCAL1P37235 193 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 NR4A2P43354 598 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 SUOXP51687 545 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 DCDC1P59894 354 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 LAPTM4AQ15012 233 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 KCNJ8Q15842 424 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 LRRTM4Q86VH4 590 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 GALNT13Q8IUC8 556 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 FBXO30Q8TB52 745 aa11.33□□□□□ -0.6
TNFAIP1-201ENST00000226225 VOPP1Q96AW1 172 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms