RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MOSPD3O75425 235 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 CPSF4O95639 269 aaKnown RBP21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 SRPRAP08240 638 aaKnown RBP21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 INHBBP09529 407 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 ZNF77Q15935 545 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 LY6G5CQ5SRR4 150 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 COQ8BQ96D53 544 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 PALMDQ9NP74 551 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 HCFC1R1Q9NWW0 138 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 SIRT5Q9NXA8 310 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 ABCG2Q9UNQ0 655 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 TPRKBQ9Y3C4 175 aa21.24■□□□□ 0.99
SMARCD2-201ENST00000225742 TTC34A8MYJ7 566 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 JRKO75564 520 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 TIMP1P01033 207 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 LAMP1P11279 417 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 JUNDP17535 347 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 GTF2H3Q13889 308 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 C16orf72Q14CZ0 275 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 TMEM215Q68D42 235 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 ERAP2Q6P179 960 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 CYP4Z1Q86W10 505 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 HORMAD1Q86X24 394 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 MIPOL1Q8TD10 442 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 TCEAL4Q96EI5 215 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 MTERF1Q99551 399 aaKnown RBP21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 PKP4Q99569 1192 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 APOL4Q9BPW4 351 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 TPT1P8Q9HAU6 139 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 TBCCD1Q9NVR7 557 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 U3KQV3 271 aa21.23■□□□□ 0.99
SMARCD2-201ENST00000225742 MMP12P39900 470 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 ITGA1P56199 1179 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 RAE1P78406 368 aaKnown RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 IL5RAQ01344 420 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 PPP1R8Q12972 351 aaKnown RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 RNF175Q8N4F7 328 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 KLHL23Q8NBE8 558 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 MED8Q96G25 268 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 HSH2DQ96JZ2 352 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 OR4K3Q96R72 315 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 CHST8Q9H2A9 424 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 KCNE2Q9Y6J6 123 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 CEP350Q5VT06 3117 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 HTTP42858 3142 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 SLC9A3R1O14745 358 aaPredicted RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 NPC1O15118 1278 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 PFDN1O60925 122 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 ANXA4P09525 319 aaPredicted RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 CSF2RAP15509 400 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 AGXTP21549 392 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 PCMT1P22061 227 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 IMPA1P29218 277 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 DAPP51397 102 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 CTSCP53634 463 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 TMEM115Q12893 351 aaPredicted RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 DDX39BQ13838 428 aaKnown RBP21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 NLRP8Q86W28 1048 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 ANKRD13BQ86YJ7 626 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 BPIFB6Q8NFQ5 453 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 AP2M1Q96CW1 435 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 WDR34Q96EX3 536 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 LINC00597Q9H2U6 94 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 LTB4R2Q9NPC1 389 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 VPS4AQ9UN37 437 aa21.22■□□□□ 0.99
SMARCD2-201ENST00000225742 TMEM202A6NGA9 273 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ZNF99A8MXY4 864 aaPredicted RBP21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ZNF197O14709 1029 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ANGPTL1O95841 491 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 CTSLP07711 333 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 LINC00271P0C7V0 271 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 SYN1P17600 705 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 TIA1P31483 386 aaKnown RBP eCLIP21.21■□□□□ 0.992e-8■■■■■ 27.3
SMARCD2-201ENST00000225742 PCGF2P35227 344 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 RAPSNQ13702 412 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ZNF648Q5T619 568 aaPredicted RBP21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 MED27Q6P2C8 311 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 GALNT18Q6P9A2 607 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 LIPIQ6XZB0 460 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 Q6ZNX1 250 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 CEP68Q76N32 757 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ZC3H7AQ8IWR0 971 aaKnown RBP21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 NPAS3Q8IXF0 933 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 CLECL1Q8IZS7 167 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 C1orf52Q8N6N3 182 aaKnown RBP21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 OR7G3Q8NG95 312 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 WFIKKN2Q8TEU8 576 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 FKBP10Q96AY3 582 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 RAD21L1Q9H4I0 556 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 REEP1Q9H902 201 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ADPRHL2Q9NX46 363 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 SCN3BQ9NY72 215 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ZNF282Q9UDV7 671 aaPredicted RBP21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ATP6V1HQ9UI12 483 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 ENPP5Q9UJA9 477 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 FBXO10Q9UK96 956 aa21.21■□□□□ 0.99
SMARCD2-201ENST00000225742 C1orf226A1L170 272 aa21.2■□□□□ 0.98
SMARCD2-201ENST00000225742 KRT87PA6NCN2 255 aa21.2■□□□□ 0.98
SMARCD2-201ENST00000225742 GABRR3A8MPY1 467 aa21.2■□□□□ 0.98
SMARCD2-201ENST00000225742 MYO1GB0I1T2 1018 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms