RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NXNL2Q5VZ03 156 aa12□□□□□ -0.49
NUP88-201ENST00000225696 LRRC66Q68CR7 880 aa12□□□□□ -0.49
NUP88-201ENST00000225696 ADNP2Q6IQ32 1131 aa12□□□□□ -0.49
NUP88-201ENST00000225696 TUBA1AQ71U36 451 aa12□□□□□ -0.49
NUP88-201ENST00000225696 EIF3MQ7L2H7 374 aaKnown RBP12□□□□□ -0.49
NUP88-201ENST00000225696 TMEM173Q86WV6 379 aaPredicted RBP12□□□□□ -0.49
NUP88-201ENST00000225696 VRK3Q8IV63 474 aa12□□□□□ -0.49
NUP88-201ENST00000225696 P3H2Q8IVL5 708 aa12□□□□□ -0.49
NUP88-201ENST00000225696 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
NUP88-201ENST00000225696 SLC5A8Q8N695 610 aa12□□□□□ -0.49
NUP88-201ENST00000225696 IL17RDQ8NFM7 739 aa12□□□□□ -0.49
NUP88-201ENST00000225696 ZNF675Q8TD23 568 aa12□□□□□ -0.49
NUP88-201ENST00000225696 EMILIN2Q9BXX0 1053 aa12□□□□□ -0.49
NUP88-201ENST00000225696 NXF2Q9GZY0 626 aaKnown RBP12□□□□□ -0.49
NUP88-201ENST00000225696 ZFYVE1Q9HBF4 777 aa12□□□□□ -0.49
NUP88-201ENST00000225696 WDR70Q9NW82 654 aa12□□□□□ -0.49
NUP88-201ENST00000225696 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
NUP88-201ENST00000225696 MKI67P46013 3256 aaKnown RBP12□□□□□ -0.49
NUP88-201ENST00000225696 AGRPO00253 132 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 CTDSP2O14595 271 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 INPPL1O15357 1258 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 DYRK3O43781 588 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 C9P02748 559 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ADORA3P0DMS8 318 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 RPL17P18621 184 aaKnown RBP11.99□□□□□ -0.49
NUP88-201ENST00000225696 CCR7P32248 378 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 HNF1BP35680 557 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 OR1E2P47887 323 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 DGKEP52429 567 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 MTAPQ13126 283 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 IRF5Q13568 498 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PTCHD3Q3KNS1 767 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PNCKQ6P2M8 343 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PRSS55Q6UWB4 352 aaPredicted RBP11.99□□□□□ -0.49
NUP88-201ENST00000225696 NEK10Q6ZWH5 1172 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ZSWIM9Q86XI8 627 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 DNAJB8Q8NHS0 232 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 SH3KBP1Q96B97 665 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 OR5M11Q96RB7 305 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 NIPSNAP1Q9BPW8 284 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 SLC29A3Q9BZD2 475 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 SLC32A1Q9H598 525 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 NEK6Q9HC98 313 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ERVK13-1Q9NX77 482 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ZNF226Q9NYT6 803 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 SLC22A14Q9Y267 594 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PCDHGB6Q9Y5F9 930 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 A0A1B0GVM2 712 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 CLCA1A8K7I4 914 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 MAGEB17A8MXT2 336 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 HAT1O14929 419 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 CDK1P06493 297 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PRPS2P11908 318 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PAX3P23760 479 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 B4GALNT1Q00973 533 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 TBCEQ15813 527 aaPredicted RBP11.99□□□□□ -0.49
NUP88-201ENST00000225696 CDKN3Q16667 212 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ARMCX4Q5H9R4 360 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 USP43Q70EL4 1123 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 CHCHD4Q8N4Q1 142 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 NELL1Q92832 810 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 MYO19Q96H55 970 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 KCNS3Q9BQ31 491 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 BBS2Q9BXC9 721 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 GABARAPL3Q9BY60 117 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ROGDIQ9GZN7 287 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 ATG10Q9H0Y0 220 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 CRLS1Q9UJA2 301 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 RPS6KA6Q9UK32 745 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 PCDHGA3Q9Y5H0 932 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 SNX8Q9Y5X2 465 aa11.99□□□□□ -0.49
NUP88-201ENST00000225696 TRBV5-4A0A0C4DH59 114 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 GLYATL1P3A0A0U1RQE8 302 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
NUP88-201ENST00000225696 TMEM189-UBE2V1I3L0A0 370 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 PCDH7O60245 1069 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 EPN2O95208 641 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 PTTG1O95997 202 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 ANXA5P08758 320 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 POU2F1P14859 743 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 CD22P20273 847 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 AOAHP28039 575 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 GGT2P36268 569 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 RGS6P49758 472 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 ELP6Q0PNE2 266 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 ST3GAL4Q11206 333 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 GPR17Q13304 367 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 GAB1Q13480 694 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 IRF3Q14653 427 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 VASH1Q7L8A9 365 aaPredicted RBP11.98□□□□□ -0.49
NUP88-201ENST00000225696 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 ELMOD1Q8N336 334 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 TCAIMQ8N3R3 496 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 SYNPOQ8N3V7 929 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 GPR26Q8NDV2 337 aa11.98□□□□□ -0.49
NUP88-201ENST00000225696 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
NUP88-201ENST00000225696 CMTM7Q96FZ5 175 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms