RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 FAM219BQ5XKK7 198 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 FBXO42Q6P3S6 717 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TMIGD1Q6UXZ0 262 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 USP53Q70EK8 1073 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF740Q8NDX6 193 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 OR4D9Q8NGE8 314 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 KLHL6Q8WZ60 621 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 UBE2E3Q969T4 207 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 PRR11Q96HE9 360 aaPredicted RBP13.47□□□□□ -0.25
SEC61B-201ENST00000223641 FAR2Q96K12 515 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 EPN3Q9H201 632 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 RHBGQ9H310 441 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TUBB1Q9H4B7 451 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 PSD3Q9NYI0 1048 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 TMEM9Q9P0T7 183 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 PPT2Q9UMR5 302 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 KLHL20Q9Y2M5 609 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 PCDHGA1Q9Y5H4 931 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 ADAMTS20P59510 1910 aa13.47□□□□□ -0.25
SEC61B-201ENST00000223641 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SLC9B1P1A6NJY1 282 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 HDAC3O15379 428 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 DKK1O94907 266 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 PVRP15151 417 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 DRD4P21917 467 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 GSTM2P28161 218 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SERPINB3P29508 390 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 HMOX2P30519 316 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SCTRP47872 440 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 INHBCP55103 352 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 MEF2AQ02078 507 aaPredicted RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 HIST2H2ACQ16777 129 aaPredicted RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 TCHHL1Q5QJ38 904 aaPredicted RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 FRG2Q64ET8 278 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 HIST2H2AA3Q6FI13 130 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 MED27Q6P2C8 311 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 FAM92BQ6ZTR7 304 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 RNF44Q7L0R7 432 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 TRIM46Q7Z4K8 759 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 ARHGAP22Q7Z5H3 698 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 WDR75Q8IWA0 830 aaKnown RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 KRT78Q8N1N4 520 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 ANKRD53Q8N9V6 530 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 AGR3Q8TD06 166 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 FRG2BQ96QU4 278 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 CCT7Q99832 543 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 ATXN7L1Q9ULK2 861 aaPredicted RBP13.46□□□□□ -0.25
SEC61B-201ENST00000223641 SNX6Q9UNH7 406 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
SEC61B-201ENST00000223641 RIF1Q5UIP0 2472 aaKnown RBP13.46□□□□□ -0.26
SEC61B-201ENST00000223641 SPEGQ15772 3267 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 FEZF1A0PJY2 475 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 NPIPB8E9PQR5 432 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 FOXE1O00358 373 aaPredicted RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 MANBAO00462 879 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 HAT1O14929 419 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 PRAMEF10O60809 474 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 CTSVO60911 334 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ULK1O75385 1050 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ZBTB11O95625 1053 aaPredicted RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 KRT6AP02538 564 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 KRT6BP04259 564 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 MSL3P1P0C860 447 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 THRAP10827 490 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 CSRP1P21291 193 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 GRK3P35626 688 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 AHRP35869 848 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 PIK3CBP42338 1070 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 GABRA4P48169 554 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 KRT6CP48668 564 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 HTR6P50406 440 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 RPS15AP62244 130 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 E2F1Q01094 437 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ZFP36L1Q07352 338 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ABRAXAS2Q15018 415 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 CACHD1Q5VU97 1274 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 VN1R5Q7Z5H4 357 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 KMT5CQ86Y97 462 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 MYLK4Q86YV6 388 aaPredicted RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 SLITRK4Q8IW52 837 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 C19orf47Q8N9M1 422 aaKnown RBP13.45□□□□□ -0.26
SEC61B-201ENST00000223641 NETO1Q8TDF5 533 aa13.45□□□□□ -0.26
SEC61B-201ENST00000223641 ZNF473Q8WTR7 871 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms