RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TMEM245Q9H330 911 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 MUC13Q9H3R2 512 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 MAP10Q9P2G4 905 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 PCDHGA9Q9Y5G4 932 aaKnown RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 OR2A25A4D2G3 310 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 STX16O14662 325 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 PAPSS2O95340 614 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FCER2P06734 321 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SBK3P0C264 359 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SLC35E2BP0CK96 405 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 RYKP34925 604 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SOX11P35716 441 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 AVPR1AP37288 418 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 PIK3CBP42338 1070 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 KCNK10P57789 538 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 IL5RAQ01344 420 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 CAPRIN1Q14444 709 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 USP10Q14694 798 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 CTXN3Q4LDR2 81 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 PDSS1Q5T2R2 415 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GPR139Q6DWJ6 353 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 UNC5DQ6UXZ4 953 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 IFNEQ86WN2 208 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SLC41A1Q8IVJ1 513 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 UMODL1-AS1Q8N2C9 162 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 RDH11Q8TC12 318 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 AP2M1Q96CW1 435 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 HMCESQ96FZ2 354 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 ZSWIM3Q96MP5 696 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 LINC00052Q96N35 136 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 PELOQ9BRX2 385 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FSD1LQ9BXM9 530 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FKBP7Q9Y680 259 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 G3V2T6 193 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 J3KR12 359 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 NOBOXO60393 691 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 EPOP01588 193 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 LCKP06239 509 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 HAPLN1P10915 354 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GADD45AP24522 165 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 POU1F1P28069 291 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FMO3P31513 532 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 DAB2P98082 770 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 MAB21L1Q13394 359 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.29
GABPB1-201ENST00000220429 BAK1Q16611 211 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FAM129BQ96TA1 746 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 ITPAQ9BY32 194 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 GPR62Q9BZJ7 368 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 TREX1Q9NSU2 369 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 RDH8Q9NYR8 311 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 MUTYHQ9UIF7 546 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
GABPB1-201ENST00000220429 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 PIPSLA2A3N6 862 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 RGS10O43665 173 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 AOC2O75106 756 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 PRSS23O95084 383 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 RHOQP17081 205 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 JUNDP17535 347 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CPN2P22792 545 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 NUP62P37198 522 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 LIPAP38571 399 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 SLC1A2P43004 574 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CTSKP43235 329 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 WNT3AP56704 352 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF91Q05481 1191 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF460Q14592 562 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 SGCAQ16586 387 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 PTCHD3Q3KNS1 767 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CENPLQ8N0S6 344 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 CAMKK1Q8N5S9 505 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 OGDHLQ9ULD0 1010 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 BBIP1A8MTZ0 92 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
GABPB1-201ENST00000220429 NPPAP01160 153 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 APOA4P06727 396 aa13.2□□□□□ -0.3
GABPB1-201ENST00000220429 SLC6A2P23975 617 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms