RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 SIMC1Q8NDZ2 872 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FLAD1Q8NFF5 587 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NEIL3Q8TAT5 605 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 RELTQ969Z4 430 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 P2RY11Q96G91 374 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TTYH3Q9C0H2 523 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 CLTCQ00610 1675 aaKnown RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 AGPAT2O15120 278 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 UBXN7O94888 489 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 LYPLA2O95372 231 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 LCP2Q13094 533 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 CDK10Q15131 360 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FXNQ16595 210 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 ARMC12Q5T9G4 340 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SVBPQ8N300 66 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 OR9I1Q8NGQ6 314 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FAM110BQ8TC76 370 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SLC25A36Q96CQ1 311 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TMEM98Q9Y2Y6 226 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MAPK9P45984 424 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 EEFSECP57772 596 aaKnown RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 SEC23BQ15437 767 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TAPT1Q6NXT6 567 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FIBCD1Q8N539 461 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FAM83FQ8NEG4 500 aaPredicted RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 CPXM1Q96SM3 734 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TCAF1Q9Y4C2 921 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SLITRK3O94933 977 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SRPRAP08240 638 aaKnown RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 MAP3K8P41279 467 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 OR12D2P58182 307 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 GABARAPL2P60520 117 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SEZ6LQ9BYH1 1024 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TNFRSF10DQ9UBN6 386 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 ENPP5Q9UJA9 477 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 WASHC1A8K0Z3 465 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 IQCF5A8MTL0 148 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MAGEB17A8MXT2 336 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MBP02144 154 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NIPAL4Q0D2K0 466 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NTRK2Q16620 822 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 ZNF705AQ6ZN79 300 aaPredicted RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 PKP4Q99569 1192 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 GBA3Q9H227 469 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SLIT1O75093 1534 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 RETP07949 1114 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SPATA31D3P0C874 917 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NAT2P11245 290 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 CETPP11597 493 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 SPATA31D4Q6ZUB0 917 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TMPRSS11BQ86T26 416 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MFSD3Q96ES6 412 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MYOCQ99972 504 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 CDT1Q9H211 546 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 HBP1O60381 514 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 RPP14O95059 124 aaKnown RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 CBR1P16152 277 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 RPL10P27635 214 aaKnown RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 SLC18A1P54219 525 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 ECM1Q16610 540 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FLYWCH1Q4VC44 716 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 NLGN1Q8N2Q7 840 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FSTL5Q8N475 847 aaPredicted RBP10.79□□□□□ -0.68
USP31-201ENST00000219689 C12orf29Q8N999 325 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 DNAJC19Q96DA6 116 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 POPDC2Q9HBU9 364 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 FAM118AQ9NWS6 357 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 STUB1Q9UNE7 303 aa10.79□□□□□ -0.68
USP31-201ENST00000219689 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CH25HO95992 272 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CDK1P06493 297 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 GDF10P55107 478 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CRB2Q5IJ48 1285 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 LYPLAL1Q5VWZ2 237 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 MON1BQ7L1V2 547 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 IQCHQ86VS3 1027 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 BRD9Q9H8M2 597 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CAPNS1P04632 268 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CTPS1P17812 591 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 ALG10Q5BKT4 473 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 PAMR1Q6UXH9 720 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CHDHQ8NE62 594 aaPredicted RBP10.78□□□□□ -0.68
USP31-201ENST00000219689 BBS1Q8NFJ9 593 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CPQQ9Y646 472 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 WNT7AO00755 349 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 PCDH8O95206 1070 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CD247P20963 164 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 PKLRP30613 574 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 CLCN4P51793 760 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 GRIN3AQ8TCU5 1115 aa10.78□□□□□ -0.68
USP31-201ENST00000219689 DLGAP4Q9Y2H0 992 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms