RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CLEC4EQ9ULY5 219 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 YIPF1Q9Y548 306 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 PABPN1LA6NDY0 278 aaKnown RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 EFCAB9A8MZ26 197 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 YY2O15391 372 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 AQP9O43315 295 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 BNIP3LO60238 219 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 GREM1O60565 184 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 CNOT3O75175 753 aaKnown RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 C8GP07360 202 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 TMED10P49755 219 aaKnown RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 HNRNPFP52597 415 aaKnown RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 ITGA1P56199 1179 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 SRSF11Q05519 484 aaKnown RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 PROX2Q3B8N5 592 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 DGKKQ5KSL6 1271 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 DSG4Q86SJ6 1040 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 ENTHD1Q8IYW4 607 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 ARL14EPQ8N8R7 260 aaPredicted RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 IPCEF1Q8WWN9 437 aaPredicted RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 ASB11Q8WXH4 323 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 TOX2Q96NM4 488 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 PSD2Q9BQI7 771 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 SACM1LQ9NTJ5 587 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 DNAJC11Q9NVH1 559 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 PCDHGA4Q9Y5G9 962 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 PIKFYVEQ9Y2I7 2098 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 NUDT7P0C024 238 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 OR56A5P0C7T3 313 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 SERPINA4P29622 427 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 MAPK8P45983 427 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 GSSP48637 474 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 SYT16Q17RD7 645 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 FAHD1Q6P587 224 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 PLEKHG7Q6ZR37 379 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 DNASE1L2Q92874 299 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 ZNF689Q96CS4 500 aaPredicted RBP16.71■□□□□ 0.27
USB1-201ENST00000219281 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 DSN1Q9H410 356 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 KLHL42Q9P2K6 505 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 OSGIN1Q9UJX0 560 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 TBX21Q9UL17 535 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 WDR37Q9Y2I8 494 aa16.71■□□□□ 0.27
USB1-201ENST00000219281 KDM1AO60341 852 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 MRPS14O60783 128 aaKnown RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 IGSF6O95976 241 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 VIPP01282 170 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 JUPP14923 745 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 HNMTP50135 292 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 PTSQ03393 145 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 ABRQ12979 859 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 CAMK2GQ13555 558 aaPredicted RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 AGAP7PQ5VUJ5 663 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 Q6ZPB1 254 aaPredicted RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 TPRG1Q6ZUI0 275 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 SLC22A16Q86VW1 577 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 HPS1Q92902 700 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 DACH2Q96NX9 599 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 PITX2Q99697 317 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 HEPHQ9BQS7 1158 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 SAGE1Q9NXZ1 904 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 KIAA1522Q9P206 1035 aaPredicted RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 SCN8AQ9UQD0 1980 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 CLDN24A6NM45 220 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 NPIPB8E9PQR5 432 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 GFRA2O00451 464 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 C9P02748 559 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 LAMP1P11279 417 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 CSNK1DP48730 415 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 FADDQ13158 208 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 SPOUT1Q5T280 376 aaKnown RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 GPR153Q6NV75 609 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 MCFD2Q8NI22 146 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 PSMA8Q8TAA3 256 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 SH3KBP1Q96B97 665 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 KCNC2Q96PR1 638 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 MTERF1Q99551 399 aaKnown RBP16.7■□□□□ 0.26
USB1-201ENST00000219281 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.7■□□□□ 0.26
USB1-201ENST00000219281 RNF6Q9Y252 685 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 BTBD3Q9Y2F9 522 aa16.7■□□□□ 0.26
USB1-201ENST00000219281 LATS1O95835 1130 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 ACPPP15309 386 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 AQP1P29972 269 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 LIPAP38571 399 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 PPP3CCP48454 512 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 CLK1P49759 484 aaKnown RBP16.69■□□□□ 0.26
USB1-201ENST00000219281 LMAN2Q12907 356 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 IQCCQ4KMZ1 466 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 UBE2UQ5VVX9 321 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 GPR155Q7Z3F1 870 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms