RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 INPPL1O15357 1258 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 EOMESO95936 686 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 PTHP01270 115 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 B4GALNT1Q00973 533 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 IFITM2Q01629 132 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 BOP1Q14137 746 aaKnown RBP13.57□□□□□ -0.24
USH1C-201ENST00000005226 TTLL9Q3SXZ7 439 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 FAHD1Q6P587 224 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 METTL4Q8N3J2 472 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 SLC5A8Q8N695 610 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 UTP15Q8TED0 518 aaKnown RBP13.57□□□□□ -0.24
USH1C-201ENST00000005226 UBTD2Q8WUN7 234 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 ATL1Q8WXF7 558 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 CMTM7Q96FZ5 175 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 C7orf34Q96L11 122 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
USH1C-201ENST00000005226 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 GLTPD2A6NH11 291 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 TRBC1P01850 177 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 C9P02748 559 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 ADRA2AP08913 450 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 AOAHP28039 575 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 OR1D2P34982 312 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 CHIT1Q13231 466 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 PLD1Q13393 1074 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 DOC2BQ14184 412 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 LRRC66Q68CR7 880 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.57□□□□□ -0.24
USH1C-201ENST00000005226 LINC00299Q6ZSB3 139 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 GDPD3Q7L5L3 318 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 TESCQ96BS2 214 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 KCNS3Q9BQ31 491 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 MMP27Q9H306 513 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 TPT1P8Q9HAU6 139 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 PSORS1C1Q9UIG5 152 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 FZD4Q9ULV1 537 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
USH1C-201ENST00000005226 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
USH1C-201ENST00000005226 GPX2P18283 190 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 BMPR1AP36894 532 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 KCNJ10P78508 379 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 BCL2L1Q07817 233 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 CDKN3Q16667 212 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 ATP13A5Q4VNC0 1218 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
USH1C-201ENST00000005226 CCBE1Q6UXH8 406 aaPredicted RBP13.56□□□□□ -0.24
USH1C-201ENST00000005226 SERPINA13PQ6UXR4 307 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 MACC1Q6ZN28 852 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 GALNT13Q8IUC8 556 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 NAGSQ8N159 534 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 ZNF675Q8TD23 568 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 CTRCQ99895 268 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 NIPSNAP1Q9BPW8 284 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 HOXD1Q9GZZ0 328 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 RAPGEFL1Q9UHV5 662 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 TMEM229AB2RXF0 380 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
USH1C-201ENST00000005226 CD22P20273 847 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 ITGA1P56199 1179 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 FRG2Q64ET8 278 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
USH1C-201ENST00000005226 HRASLS5Q96KN8 279 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 FRG2BQ96QU4 278 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 SLX1AQ9BQ83 275 aa13.56□□□□□ -0.24
USH1C-201ENST00000005226 TP63Q9H3D4 680 aaPredicted RBP13.56□□□□□ -0.24
USH1C-201ENST00000005226 J3KTA2 159 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CTDSP2O14595 271 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 PCDH7O60245 1069 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CDC20Q12834 499 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ZNF852Q6ZMS4 543 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 SLC46A3Q7Z3Q1 461 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 DNAJC22Q8N4W6 341 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 DNAJB8Q8NHS0 232 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 COPS8Q99627 209 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 PITX2Q99697 317 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 RDH14Q9HBH5 336 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 PRRC2BQ5JSZ5 2229 aaKnown RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 TRBV5-4A0A0C4DH59 114 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TNFRSF11BO00300 401 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 AP3D1O14617 1153 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 HMGA1P17096 107 aaKnown RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 GAB1Q13480 694 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ZNF648Q5T619 568 aaPredicted RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 CACTIN-AS1Q8N1I8 211 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 KIAA1958Q8N8K9 716 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 GPR156Q8NFN8 814 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms