RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RAB41Q5JT25 222 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM78AQ5JUQ0 283 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC30A6Q6NXT4 461 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 MFSD6LQ8IWD5 586 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 TMIEQ8NEW7 156 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 WASH4PA8MWX3 477 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 BHMG1C9JSJ3 638 aaPredicted RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ADAM12O43184 909 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 S1PR4O95977 384 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 CREB1P16220 341 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF823P16415 610 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM189BP81408 668 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 RPA4Q13156 261 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 PEG10Q86TG7 708 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 NRROSQ86YC3 692 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ZDHHC21Q8IVQ6 265 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 KBTBD8Q8NFY9 601 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 OR4K14Q8NGD5 310 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 RHEBL1Q8TAI7 183 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM110BQ8TC76 370 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 COL21A1Q96P44 957 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF334Q9HCZ1 680 aaPredicted RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 PRODH2Q9UF12 536 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 TESMINQ9Y4I5 508 aa10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 VIRMAQ69YN4 1812 aaKnown RBP10.04□□□□□ -0.8
NIPAL3-201ENST00000003912 LDB2O43679 373 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 OR2B3O76000 313 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CSTF1Q05048 431 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF763Q0D2J5 394 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SHHQ15465 462 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF678Q5SXM1 525 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PSAPL1Q6NUJ1 521 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZCCHC7Q8N3Z6 543 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TSPAN14Q8NG11 270 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MOAP1Q96BY2 351 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PELOQ9BRX2 385 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SPRTNQ9H040 489 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PTGES2Q9H7Z7 377 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SMURF2Q9HAU4 748 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 S100A14Q9HCY8 104 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CRNNQ9UBG3 495 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PLK4O00444 970 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MYCLP1P12525 358 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ENGP17813 658 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RCVRNP35243 200 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TDGQ13569 410 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RINLQ6ZS11 566 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ADGRD2Q7Z7M1 963 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 GALNT5Q7Z7M9 940 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 FCRL4Q96PJ5 515 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CPEB1Q9BZB8 566 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 LDAHQ9H6V9 325 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SSR3Q9UNL2 185 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 DMTF1Q9Y222 760 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 HNRNPCP07910 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 HBQ1P09105 142 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 YAP1P46937 504 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 KCNC1P48547 511 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MTTPP55157 894 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RPS15P62841 145 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 EMX2Q04743 252 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PDK3Q15120 406 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC44A4Q53GD3 710 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TICAM1Q8IUC6 712 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC34A3Q8N130 599 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 AMER2Q8N7J2 671 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM13CQ8NE31 585 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM81AQ8TBF8 368 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 KCNC2Q96PR1 638 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 OR8D2Q9GZM6 311 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 HEBP1Q9NRV9 189 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 hCG_2039718K7EN88 272 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 BTN3A3O00478 584 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RSL1D1O76021 490 aaKnown RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 PRAMEF12O95522 483 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 OLR1P78380 273 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 MED22Q15528 200 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RSBN1Q5VWQ0 802 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 TSPAN33Q86UF1 283 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CBARPQ8N350 705 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 OR5AK3PQ8NH89 298 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 NEK7Q8TDX7 302 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 AGAP11Q8TF27 550 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 EFHD2Q96C19 240 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 CENPNQ96H22 339 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 DLGAP4Q9Y2H0 992 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 EIF3FO00303 357 aaPredicted RBP10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 BCKDKO14874 412 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 KLF11O14901 512 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 ITM2AO43736 263 aa10.03□□□□□ -0.8
NIPAL3-201ENST00000003912 RENP00797 406 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms