RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Uchl1Q9R0P9 223 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Arrdc4A0A0B4J1F4 415 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm33543A0A1B0GSI5 81 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm13212B1ASQ7 799 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Prl4a1O35256 227 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Sema6bO54951 886 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gadd45aP48316 165 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 OstnP61364 130 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Scn4bQ7M729 228 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 AmnQ99JB7 458 aaKnown RBP10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 TesclQ9DAJ7 231 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tor1bQ9ER41 336 aa10.2□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Lamb2Q61292 1799 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Spin2gA0A0N4SW15 236 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm5519D3Z175 170 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm8334F7CD45 553 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Spin2eJ3QNQ0 234 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cyp2b10P12791 500 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Sept4P28661 478 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ranbp9P69566 653 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Clec4a4Q5YIR8 236 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tfap2bQ61313 459 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tm7sf2Q71KT5 418 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 FukQ7TMC8 1090 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Efemp1Q8BPB5 493 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Vmn1r219Q8R271 312 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 CpzQ8R4V4 654 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 BollQ924M5 281 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Mzb1Q9D8I1 188 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Olfr630Q9EQQ7 319 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Dnajb1Q9QYJ3 340 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm6526G3X9Q9 198 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Per3O70361 1113 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Mid1O70583 680 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 MazP56671 477 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Prokr1Q9JKL1 393 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Psmd13Q9WVJ2 376 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 SelenonD3Z2R5 557 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Aldh3b2E9Q3E1 479 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 BB287469Q3UT53 144 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Abcb7Q61102 752 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tusc3Q8BTV1 347 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pcdha8Q91Y12 946 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rnase10Q9D5A9 208 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 2010300C02RikE9Q3M9 1175 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Olfr520E9Q518 316 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Arl6O88848 186 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Q3KQP7 184 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 E330014E10RikQ3UL33 481 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 D5Ertd577eQ499F0 481 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rnf43Q5NCP0 784 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pea15Q62048 130 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Smpd4Q6ZPR5 823 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Eci3Q78JN3 317 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Aoc2Q812C9 757 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Clrn1Q8K445 232 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gpn2Q8VEJ1 310 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Krcc1Q99JT5 256 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 MthfrQ9WU20 654 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 TriobpQ99KW3 2014 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm36210A0A1B0GS00 229 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ggta1l1A2AUQ7 319 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Sec14l5B2RXM5 696 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Izumo4D3Z690 227 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Klrg2Q3UM83 387 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cyp2c54Q6XVG2 490 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Hmbox1Q8BJA3 419 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ugt2b35Q8BJL9 529 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Slco2b1Q8BXB6 683 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Mptx1Q8R1M8 219 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Akr1e2Q9DCT1 301 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Hspb3Q9QZ57 154 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 BC024978J3QPC3 361 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ppm1bP36993 390 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Clec4b1Q7TS58 209 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Fstl5Q8BFR2 847 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pxdc1Q8JZU6 231 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gspt1Q8R050 636 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ugt2b1Q8R084 529 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Olfr847Q8VFF4 312 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Kcnq4Q9JK97 696 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Chrac1Q9JKP8 129 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 NagaQ9QWR8 415 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Clec2lP0C7M9 211 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cyp2a12P56593 492 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Art5P70352 309 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Inppl1Q6P549 1257 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cypt2Q6P924 180 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Slc22a18Q78KK3 406 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ppp1r1cQ8BKK4 108 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cndp1Q8BUG2 492 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Slc8b1Q925Q3 585 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Otub2Q9CQX0 234 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rfx5Q9JL61 658 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Adam24Q9R160 761 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cyp2g1Q9WV19 494 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Smchd1Q6P5D8 2007 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp949E9Q732 603 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cxcr2P35343 359 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Bpifb1Q61114 474 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms