RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 VEZF1Q14119 521 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 E2F2Q14209 437 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 UGT8Q16880 541 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 VMACQ2NL98 169 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 ZIK1Q3SY52 487 aaPredicted RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 ZC3H12BQ5HYM0 836 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 ZNF648Q5T619 568 aaPredicted RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 BROXQ5VW32 411 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 CPZQ66K79 652 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 ZNF621Q6ZSS3 439 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 CLVS1Q8IUQ0 354 aaPredicted RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 FAM86B1Q8N7N1 296 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 HDAC2Q92769 488 aaKnown RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 BADQ92934 168 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 TMIGD2Q96BF3 282 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 ZSWIM3Q96MP5 696 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 PKP4Q99569 1192 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 DUSP26Q9BV47 211 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 NPLQ9BXD5 320 aaPredicted RBP11.73□□□□□ -0.53
CLN8-212ENST00000637083 ITM2CQ9NQX7 267 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 FAM118AQ9NWS6 357 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 BTNL2Q9UIR0 455 aa11.73□□□□□ -0.53
CLN8-212ENST00000637083 MGAT4DA6NG13 374 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 SCAMP2O15127 329 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 SLC16A8O95907 504 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 MYCLP1P12525 358 aaPredicted RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 CEBPBP17676 345 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ENGP17813 658 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 MAGEA2P43356 314 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 BDKRB1P46663 353 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 PREPP48147 710 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CBX2Q14781 532 aaPredicted RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 PLCL1Q15111 1095 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 NKG7Q16617 165 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CPTPQ5TA50 214 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CES5AQ6NT32 575 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ZCCHC8Q6NZY4 707 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 ZNF773Q6PK81 442 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 SPESP1Q6UW49 350 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CAMKMTQ7Z624 323 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ARL10Q8N8L6 244 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 SNX19Q92543 992 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 UBE2E3Q969T4 207 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 NUS1Q96E22 293 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 MAGED4Q96JG8 741 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 MTERF1Q99551 399 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 EBPLQ9BY08 206 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TOR3AQ9H497 397 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CARS2Q9HA77 564 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 DYRK4Q9NR20 520 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 PCDHB11Q9Y5F2 797 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TMEM202A6NGA9 273 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 C1orf105O95561 183 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CPSF4O95639 269 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 ANXA4P09525 319 aaPredicted RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 CD22P20273 847 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 EEF1B2P24534 225 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 IRS1P35568 1242 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 DCTP40126 519 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CDKN2CP42773 168 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 GPR1P46091 355 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 GABARAPL2P60520 117 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 DPTQ07507 201 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TUBA3CQ13748 450 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 GRIN2CQ14957 1233 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 FNDC3BQ53EP0 1204 aaKnown RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 SLC44A4Q53GD3 710 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TMEM26Q6ZUK4 368 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 KCTD8Q6ZWB6 473 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ZDHHC21Q8IVQ6 265 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 OR7G3Q8NG95 312 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 OR7A2PQ8NGA2 310 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 WDR34Q96EX3 536 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 LINC00615Q96LM1 132 aaPredicted RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 MTG2Q9H4K7 406 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 EHD1Q9H4M9 534 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 CXorf21Q9HAI6 301 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TRIM39Q9HCM9 518 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TM9SF3Q9HD45 589 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ATAD3AQ9NVI7 634 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 SIRT5Q9NXA8 310 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 TMEM9Q9P0T7 183 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 DEC1Q9P2X7 70 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 ZNF282Q9UDV7 671 aaPredicted RBP11.72□□□□□ -0.53
CLN8-212ENST00000637083 GPR34Q9UPC5 381 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 GMEB1Q9Y692 573 aa11.72□□□□□ -0.53
CLN8-212ENST00000637083 FOXE1O00358 373 aaPredicted RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 VEGFDO43915 354 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 HS6ST1O60243 411 aa11.71□□□□□ -0.53
CLN8-212ENST00000637083 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
CLN8-212ENST00000637083 SCN2BO60939 215 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms