RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 IGKV1-8A0A0C4DH67 115 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 HYKKA2RU49 373 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 NCF1BA6NI72 391 aaPredicted RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 NCF1CA8MVU1 366 aaPredicted RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 H0YGG7 62 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 H3BMH7 237 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 TERTO14746 1132 aaKnown RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 PRPF4O43172 522 aaKnown RBP eCLIP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 KRT38O76015 456 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 RECKO95980 971 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CTSBP07858 339 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CDH1P12830 882 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 NCF1P14598 390 aaPredicted RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CD1DP15813 335 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 MSH2P43246 934 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CCR10P46092 362 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 ARF3P61204 181 aaPredicted RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 RELAQ04206 551 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 BMPR2Q13873 1038 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 NKAIN1Q4KMZ8 207 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 KLC3Q6P597 504 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 FAM198BQ6UWH4 519 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CMC1Q7Z7K0 106 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 GPSM1Q86YR5 675 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 SPATA6LQ8N4H0 392 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 OR56A3Q8NH54 315 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 EXTL1Q92935 676 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 GBP5Q96PP8 586 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 PAFAH2Q99487 392 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 AKIRIN1Q9H9L7 192 aaPredicted RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 WWOXQ9NZC7 414 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 CD274Q9NZQ7 290 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
LIN28B-202ENST00000635857 ACOT9Q9Y305 439 aa16.28■□□□□ 0.2
LIN28B-202ENST00000635857 FAM208BQ5VWN6 2430 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 HEATR5BQ9P2D3 2071 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 LOC105369274A0A096LPK9 316 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 LOC102723532A0A0G2JNH3 316 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 FITM1A5D6W6 292 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 POC1B-GALNT4F8VUJ3 575 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 NRP2O60462 931 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 LTA4HP09960 611 aaKnown RBP16.27■□□□□ 0.2
LIN28B-202ENST00000635857 CNTFP26441 200 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 TYK2P29597 1187 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 SLC26A3P40879 764 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 FOLR3P41439 243 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 CCR8P51685 355 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 PMS2P54278 862 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 RPS18P62269 152 aaKnown RBP16.27■□□□□ 0.2
LIN28B-202ENST00000635857 SLC9A5Q14940 896 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 TGFBIQ15582 683 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 FAM83EQ2M2I3 478 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 DEFB109BQ30KR1 87 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 LGSNQ5TDP6 509 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 FBXO42Q6P3S6 717 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 THOC6Q86W42 341 aaKnown RBP16.27■□□□□ 0.2
LIN28B-202ENST00000635857 RAB43Q86YS6 212 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 OR4N4Q8N0Y3 316 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 UHMK1Q8TAS1 419 aaKnown RBP16.27■□□□□ 0.2
LIN28B-202ENST00000635857 STAG3L4Q8TBR4 150 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 TTC9Q92623 222 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 EXT2Q93063 718 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 THAP11Q96EK4 314 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 TSNARE1Q96NA8 513 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 ZNF285Q96NJ3 590 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 FUT8Q9BYC5 575 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 IKZF3Q9UKT9 509 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 TCFL5Q9UL49 500 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 CDC14AQ9UNH5 594 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 MAN2B2Q9Y2E5 1009 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 KCNE2Q9Y6J6 123 aa16.27■□□□□ 0.2
LIN28B-202ENST00000635857 IPO13O94829 963 aaKnown RBP16.26■□□□□ 0.19
LIN28B-202ENST00000635857 WDR47O94967 919 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SLC35G6P0C7Q6 338 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SLC35E2BP0CK96 405 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SFTPCP11686 197 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 NPPBP16860 134 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 EMP3P54852 163 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 TBR1Q16650 682 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 UGT8Q16880 541 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 GARNL3Q5VVW2 1013 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 ZNF385CQ66K41 422 aaPredicted RBP16.26■□□□□ 0.19
LIN28B-202ENST00000635857 PRMT9Q6P2P2 845 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 PLD3Q8IV08 490 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 CAMKVQ8NCB2 501 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 APOBEC4Q8WW27 367 aaKnown RBP16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SLC44A1Q8WWI5 657 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SLC5A11Q8WWX8 675 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 THAP4Q8WY91 577 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SLC39A7Q92504 469 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 KIAA1191Q96A73 305 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 COL26A1Q96A83 441 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 FKBP10Q96AY3 582 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 UBXN10Q96LJ8 280 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 RUFY1Q96T51 708 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 ALG9Q9H6U8 611 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 ENAMQ9NRM1 1142 aa16.26■□□□□ 0.19
LIN28B-202ENST00000635857 SNX15Q9NRS6 342 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms