RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 PAQR7Q86WK9 346 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ZNF655Q8N720 491 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 N4BP2L2Q92802 583 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ZBTB9Q96C00 473 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 PRAP1Q96NZ9 151 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 TMEM237Q96Q45 408 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ZNF382Q96SR6 550 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ZFYVE21Q9BQ24 234 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 NOL11Q9H8H0 719 aaKnown RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ACTR8Q9H981 624 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 FBXO8Q9NRD0 319 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 ENAMQ9NRM1 1142 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 INTS9Q9NV88 658 aaKnown RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 SOHLH2Q9NX45 425 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 TSC22D4Q9Y3Q8 395 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
PTPN7-219ENST00000629151 FAM186AA6NE01 2351 aa11.09□□□□□ -0.63
PTPN7-219ENST00000629151 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.63
PTPN7-219ENST00000629151 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 BPTFQ12830 3046 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 CCDC187A0A096LP49 1063 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 B4E171 279 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 ENO1P06733 434 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 CDH1P12830 882 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 ST6GAL1P15907 406 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PSMB5P28074 263 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TSPAN7P41732 249 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 ID4P47928 161 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 LSSP48449 732 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 EMP3P54852 163 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 RAB15P59190 212 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PPP1CAP62136 330 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PHEXP78562 749 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 YOD1Q5VVQ6 348 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TMIGD1Q6UXZ0 262 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 FRMD7Q6ZUT3 714 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TMPRSS11BQ86T26 416 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 FAM129CQ86XR2 697 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 MCATQ8IVS2 390 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 DNAJC22Q8N4W6 341 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 L3MBTL4Q8NA19 623 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TRPV3Q8NET8 790 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 OR6Y1Q8NGX8 325 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 WDR36Q8NI36 951 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 RERGQ96A58 199 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TEFMQ96QE5 360 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 NRTNQ99748 197 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 ZPBPQ9BS86 351 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 GATA5Q9BWX5 397 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 NLNQ9BYT8 704 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 C12orf65Q9H3J6 166 aaKnown RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 SLC6A20Q9NP91 592 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PFDN4Q9NQP4 134 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PSD3Q9NYI0 1048 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
PTPN7-219ENST00000629151 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 PTPRZ1P23471 2315 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 ARID1BQ8NFD5 2236 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-219ENST00000629151 IGKV1-8A0A0C4DH67 115 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 A8MU76 341 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 E7EQ34 232 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 H0YIV9 168 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 KLF11O14901 512 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 ESRRBO95718 433 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 KRT6AP02538 564 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 KRT6BP04259 564 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 FGF4P08620 206 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 EPORP19235 508 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 MPSTP25325 297 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 ARL1P40616 181 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-219ENST00000629151 KRT6CP48668 564 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 SEPHS1P49903 392 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 CDH13P55290 713 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 REEP5Q00765 189 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 MC2RQ01718 297 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 STX3Q13277 289 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 DOC2AQ14183 400 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 RCN2Q14257 317 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 RBBP7Q16576 425 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 FBXO48Q5FWF7 155 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 CATSPEREQ5SY80 951 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 TMEM164Q5U3C3 297 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 FCRL6Q6DN72 434 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 GRHL2Q6ISB3 625 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 FBXO42Q6P3S6 717 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 TLDC1Q6P9B6 456 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 GPRIN3Q6ZVF9 776 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 RNF44Q7L0R7 432 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 RAB11FIP2Q7L804 512 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 TMPRSS9Q7Z410 1059 aa11.07□□□□□ -0.64
PTPN7-219ENST00000629151 TRIM73Q86UV7 250 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms