RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 GPR27Q9NS67 375 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 RIC8BQ9NVN3 520 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 DMTF1Q9Y222 760 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 KCNK6Q9Y257 313 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 BTBD3Q9Y2F9 522 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 HS3ST3A1Q9Y663 406 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 SPEGQ15772 3267 aa9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 FASNP49327 2511 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-223ENST00000627587 A0A1W2PPC4 97 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 E7ENX8 843 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 LSM1O15116 133 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 EML2O95834 649 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 NQO1P15559 274 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 LBPP18428 481 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 PRDX6P30041 224 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 NUDT1P36639 197 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 DIO3P55073 304 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TBPL1P62380 186 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TAP2Q03519 686 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ILKQ13418 452 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 SQLEQ14534 574 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 CLCA4Q14CN2 919 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 FUNDC1Q8IVP5 155 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 OR9I1Q8NGQ6 314 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 OR5K2Q8NHB8 316 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 NXPE2Q96DL1 559 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 IL17FQ96PD4 163 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 OR2M4Q96R27 311 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 INSM2Q96T92 566 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ELF4Q99607 663 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 SGPP1Q9BX95 441 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 CADM1Q9BY67 442 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 SLC29A3Q9BZD2 475 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KLQ9UEF7 1012 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 PLAGL1Q9UM63 463 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KNL1Q8NG31 2342 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 URB1O60287 2271 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 PRAMEF33A0A0G2JMD5 474 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 LOC100653049A0A140TA62 436 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 E7EQ34 232 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 MANBAO00462 879 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TNFRSF10CO14798 259 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 UGDHO60701 494 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 PEX11AO75192 247 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ULK1O75385 1050 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KRT34O76011 436 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KRT6AP02538 564 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KRT6BP04259 564 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 COX4I1P13073 169 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 JUPP14923 745 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 NPPBP16860 134 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 IDSP22304 550 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 GPX3P22352 226 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 HALP42357 657 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 RABIFP47224 123 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ZFP36L2P47974 494 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 KRT6CP48668 564 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 STX1BP61266 288 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 YBX1P67809 324 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ALG11Q2TAA5 492 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ATP6AP1LQ52LC2 224 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 C6orf136Q5SQH8 315 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 CAPN13Q6MZZ7 669 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TBC1D21Q8IYX1 336 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 CCL4L1Q8NHW4 92 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 C12orf66Q96MD2 445 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 BTBD10Q9BSF8 475 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 ERVMER34-1Q9H9K5 563 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 SCHIP1Q9P0W5 487 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 PRDM4Q9UKN5 801 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 TDRKHQ9Y2W6 561 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 GPR45Q9Y5Y3 372 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 NBEAQ8NFP9 2946 aa9.17□□□□□ -0.94
PDLIM5-223ENST00000627587 COL5A1P20908 1838 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 ACACAQ13085 2346 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 CABIN1Q9Y6J0 2220 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 PDZK1P1A8MUH7 402 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 B2RBV5 119 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 CLGNO14967 610 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 GYG2O15488 501 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 GSC2O15499 205 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 RGS14O43566 566 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 RFPL3O75679 317 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 THRAP10827 490 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 CD38P28907 300 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 ARRB1P49407 418 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 ATP4BP51164 291 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 PNLIPRP1P54315 467 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 IRX1P78414 480 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 MXRA7P84157 204 aa9.16□□□□□ -0.94
PDLIM5-223ENST00000627587 IRF8Q02556 426 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms