RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 P2RX3P56373 397 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 OLR1P78380 273 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 ST3GAL4Q11206 333 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 PTPRRQ15256 657 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 NOXA1Q86UR1 476 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 LPCAT1Q8NF37 534 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 GRPEL2Q8TAA5 225 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 HCAR2Q8TDS4 363 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 USP7Q93009 1102 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TSSK3Q96PN8 268 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 EPYCQ99645 322 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 EGFL8Q99944 293 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 ACPTQ9BZG2 426 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 IRF2BPLQ9H1B7 796 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 SMURF1Q9HCE7 757 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TAS2R16Q9NYV7 291 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 WWOXQ9NZC7 414 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 CRNNQ9UBG3 495 aaPredicted RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 MUTYHQ9UIF7 546 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 PCDHB5Q9Y5E4 795 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 A0A075B6Q4 140 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 GFRA2O00451 464 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 YES1P07947 543 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 OR4Q2P0C623 313 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TRAPPC2P0DI81 140 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TRAPPC2BP0DI82 140 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TACR1P25103 407 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 SLC39A12Q504Y0 691 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 GNASQ5JWF2 1037 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 EFHBQ8N7U6 833 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TPD52L3Q96J77 140 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 CD244Q9BZW8 370 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 OLA1Q9NTK5 396 aaKnown RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 ZNF226Q9NYT6 803 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 TRPS1Q9UHF7 1281 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 NUP214P35658 2090 aaPredicted RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 CLIC1O00299 241 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 PLK4O00444 970 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 LRATO95237 230 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 TBX18O95935 607 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ITGB1P05556 798 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 COL6A1P12109 1028 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ENGP17813 658 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 TSTQ16762 297 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 TOR1AIP1Q5JTV8 583 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 OR4F3Q6IEY1 312 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 LYPD8Q6UX82 237 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ZNF367Q7RTV3 350 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ZNF605Q86T29 641 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 CADM2Q8N3J6 435 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ULK4Q96C45 1275 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 DPH2Q9BQC3 489 aaPredicted RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 VPS4AQ9UN37 437 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 OARD1Q9Y530 152 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 V9GYH0 126 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 TFECO14948 347 aaPredicted RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 STX7O15400 261 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 RRM2P31350 389 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 MAPKAPK2P49137 400 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 BAK1Q16611 211 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 CEP78Q5JTW2 689 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ERAP2Q6P179 960 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 C19orf48Q6RUI8 117 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 FAM124AQ86V42 546 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ATCAYQ86WG3 371 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 SLC7A6Q92536 515 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 C7orf34Q96L11 122 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 FYTTD1Q96QD9 318 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 OR5M11Q96RB7 305 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 FEVQ99581 238 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 TSEN34Q9BSV6 310 aaKnown RBP13.67□□□□□ -0.22
LDB3-209ENST00000623056 NTMT1Q9BV86 223 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 ROGDIQ9GZN7 287 aa13.67□□□□□ -0.22
LDB3-209ENST00000623056 MMP28Q9H239 520 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms