RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ADPGKQ9BRR6 497 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 MRPL4Q9BYD3 311 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 GPR63Q9BZJ6 419 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ST6GALNAC4Q9H4F1 302 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ASB7Q9H672 318 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ACTR8Q9H981 624 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF222Q9UK12 451 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ANKRD28O15084 1053 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PSIP1O75475 530 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 CELF2O95319 508 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 TGM6O95932 706 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DCTP40126 519 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF81P51508 661 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 HERVK_113P63132 956 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CSTF1Q05048 431 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 RIPPLY1Q0D2K3 151 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 GRIK4Q16099 956 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 COQ5Q5HYK3 327 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 TOR1AIP1Q5JTV8 583 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 TRIQKQ629K1 86 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 FCRLBQ6BAA4 426 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ADGRD2Q7Z7M1 963 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZC3HC1Q86WB0 502 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 SLC41A1Q8IVJ1 513 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 WDTC1Q8N5D0 677 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 OR52N1Q8NH53 320 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF675Q8TD23 568 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 SLC47A1Q96FL8 570 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 WDR18Q9BV38 432 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 LRRC3Q9BY71 257 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 OLA1Q9NTK5 396 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 TJP2Q9UDY2 1190 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 MAFBQ9Y5Q3 323 aaPredicted RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 V9GYH0 126 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 FABP12A6NFH5 140 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PROM1O43490 865 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 VPS26AO75436 327 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ENDOD1O94919 500 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 C4BPAP04003 597 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF806P0C7X5 589 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 INPP1P49441 399 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 HK3P52790 923 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PLK1P53350 603 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DNAJB13P59910 316 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 OSTNP61366 133 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 HSF2Q03933 536 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 TP53BP2Q13625 1128 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DSG2Q14126 1118 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF79Q15937 498 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CDKL4Q5MAI5 379 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PDSS1Q5T2R2 415 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 GPR158Q5T848 1215 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 SAXO2Q658L1 398 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 ZNF852Q6ZMS4 543 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 RTL4Q6ZR62 310 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 DPP9Q86TI2 863 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 MAP4K3Q8IVH8 894 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PCDH19Q8TAB3 1148 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 NANPQ8TBE9 248 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 RXFP2Q8WXD0 754 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 PGLYRP2Q96PD5 576 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 SORCS2Q96PQ0 1159 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 GALNT9Q9HCQ5 603 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 NLKQ9UBE8 527 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 CNTN6Q9UQ52 1028 aa7.7□□□□□ -1.18
VPS11-209ENST00000622309 FOCADQ5VW36 1801 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 A0A0G2JPF8 293 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 TARM1B6A8C7 271 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 HNRNPCL3B7ZW38 293 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 LZTS3O60299 673 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 EPOP01588 193 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ITGB1P05556 798 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SLC35E2BP0CK96 405 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 HNRNPCL4P0DMR1 293 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PRKAR1AP10644 381 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SLC2A4P14672 509 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 ARSBP15848 533 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 EFNA1P20827 205 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 AIF1P55008 147 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 KEAP1Q14145 624 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 MAD2L1BPQ15013 274 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 MAPKAPK3Q16644 382 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 AARDQ4LEZ3 155 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PAN2Q504Q3 1202 aaKnown RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 TSTD2Q5T7W7 516 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 FAM102AQ5T9C2 384 aaPredicted RBP7.69□□□□□ -1.18
VPS11-209ENST00000622309 HES5Q5TA89 166 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 LAIR1Q6GTX8 287 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 PYHIN1Q6K0P9 492 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 BLOC1S3Q6QNY0 202 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 CCDC149Q6ZUS6 474 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 GPRIN3Q6ZVF9 776 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 NUP54Q7Z3B4 507 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 RNF130Q86XS8 419 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 RNF135Q8IUD6 432 aa7.69□□□□□ -1.18
VPS11-209ENST00000622309 LAX1Q8IWV1 398 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms