RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 CREG1O75629 220 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 SEC14L2O76054 403 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 PRKD3O94806 890 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 PDYNP01213 254 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 EPHX1P07099 455 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 PRPS2P11908 318 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 CRHBPP24387 322 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 RPIAP49247 311 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 HNRNPFP52597 415 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 IST1P53990 364 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 MRPS21P82921 87 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 BOP1Q14137 746 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 NEDD8Q15843 81 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 HNRNPA1L2Q32P51 320 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 BROXQ5VW32 411 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 FRS2Q8WU20 508 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 FAM162AQ96A26 154 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 SCRN2Q96FV2 425 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 HHIPQ96QV1 700 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 NELL2Q99435 816 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 RBM4BQ9BQ04 359 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 DCUN1D5Q9BTE7 237 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 RBM4Q9BWF3 364 aaKnown RBP16.91■□□□□ 0.3
FAM3A-222ENST00000621967 AMBRA1Q9C0C7 1298 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 ING2Q9H160 280 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 TMEM245Q9H330 911 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 TBC1D17Q9HA65 648 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 UTS2RQ9UKP6 389 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 DLGAP4Q9Y2H0 992 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 STON1Q9Y6Q2 735 aa16.91■□□□□ 0.3
FAM3A-222ENST00000621967 WASH3PC4AMC7 463 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TMX2-CTNND1H3BSU7 103 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 B4GAT1O43505 415 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ABCB7O75027 752 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 PCSK2P16519 638 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 PTPN6P29350 595 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 CCR7P32248 378 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 WASP42768 502 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TUBA3CQ13748 450 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ZXDCQ2QGD7 858 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 CARD16Q5EG05 197 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 XAF1Q6GPH4 301 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 FAM9CQ8IZT9 166 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TCAIMQ8N3R3 496 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 CLHC1Q8NHS4 586 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 MCCC1Q96RQ3 725 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 COPS8Q99627 209 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TBCDQ9BTW9 1192 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 FOXQ1Q9C009 403 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 NAA50Q9GZZ1 169 aaKnown RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 MTG2Q9H4K7 406 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 SMURF2Q9HAU4 748 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ARL15Q9NXU5 204 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 GALNT8Q9NY28 637 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 HECAQ9UBI9 543 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 A8MX80 341 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 KLF8O95600 359 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 NTSR1P30989 418 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 SLC6A12P48065 614 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ENTPD1P49961 510 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TMBIM6P55061 237 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 CPSF6Q16630 551 aaKnown RBP eCLIP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 LRRC66Q68CR7 880 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 GCNT7Q6ZNI0 430 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 PHACTR4Q8IZ21 702 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ZCCHC7Q8N3Z6 543 aaKnown RBP16.9■□□□□ 0.3
FAM3A-222ENST00000621967 IL17RCQ8NAC3 791 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 OR5K1Q8NHB7 308 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 RPLP0P6Q8NHW5 317 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 TESCQ96BS2 214 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 SLC12A9Q9BXP2 914 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 PCDHGA8Q9Y5G5 932 aa16.9■□□□□ 0.3
FAM3A-222ENST00000621967 ATG2BQ96BY7 2078 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 A0A1W2PPW3 197 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 SERTM1A2A2V5 107 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 FAM170BA6NMN3 283 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 C16orf96A6NNT2 1141 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 NUAK1O60285 661 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 C8GP07360 202 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 CHRNB1P11230 501 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 ACPPP15309 386 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 LHCGRP22888 699 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 AOAHP28039 575 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 DCTP40126 519 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 GABARAPL2P60520 117 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 PTSQ03393 145 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 SIGLEC14Q08ET2 396 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 STARD3Q14849 445 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 ATP13A5Q4VNC0 1218 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 KLHL35Q6PF15 583 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 DPY19L3Q6ZPD9 716 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 UBE2R2Q712K3 238 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-222ENST00000621967 HS3ST5Q8IZT8 346 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 C10orf111Q8N326 155 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 TMEM132CQ8N3T6 1108 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
FAM3A-222ENST00000621967 CHDHQ8NE62 594 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms