RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 IP6K3Q96PC2 410 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 NUDT9Q9BW91 350 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 PHACTR1Q9C0D0 580 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 PPANQ9NQ55 473 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 P4HTMQ9NXG6 502 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 NFU1Q9UMS0 254 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 MAU2Q9Y6X3 613 aa17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-213ENST00000621748 DOCK10Q96BY6 2186 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 MASP2O00187 686 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 ALBP02768 609 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 PIM1P11309 404 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 PRTGQ2VWP7 1150 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 GALNT7Q86SF2 657 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 ANKMY2Q8IV38 441 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 C10orf90Q96M02 699 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 SPSB2Q99619 263 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 SLC26A1Q9H2B4 701 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 ANKMY1Q9P2S6 941 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 CTSFQ9UBX1 484 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 PDE10AQ9Y233 779 aa17.14■□□□□ 0.33
SCAMP4-213ENST00000621748 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 PEX12O00623 359 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 CCNDBP1O95273 360 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 PHBP35232 272 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 MAGEA4P43358 317 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 RGS4P49798 205 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 ABATP80404 500 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 FOXK1P85037 733 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 RAPSNQ13702 412 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 TRADDQ15628 312 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 ERCC6LQ2NKX8 1250 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 NADK2Q4G0N4 442 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 DCAF10Q5QP82 559 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 LRRC8EQ6NSJ5 796 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 ZDHHC24Q6UX98 284 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 MBOAT1Q6ZNC8 495 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 FBXO36Q8NEA4 188 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 FER1L6-AS2Q96M78 137 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 OR2A5Q96R48 311 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 WDR54Q9H977 334 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 CUEDC1Q9NWM3 386 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 NUP210LQ5VU65 1888 aa17.13■□□□□ 0.33
SCAMP4-213ENST00000621748 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 H7BY64 318 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 HAT1O14929 419 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 TSPAN12O95859 305 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 MLLT10P55197 1068 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 HKDC1Q2TB90 917 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 THEMIS2Q5TEJ8 643 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 HECTD2Q5U5R9 776 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 PLD3Q8IV08 490 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 MYO1HQ8N1T3 1032 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 CSNK1A1LQ8N752 337 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 LINGO1Q96FE5 620 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 CCDC138Q96M89 665 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 PRAP1Q96NZ9 151 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 OLFM1Q99784 485 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 SOX17Q9H6I2 414 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 PARVBQ9HBI1 364 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 ZNF304Q9HCX3 659 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 ZDHHC18Q9NUE0 388 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 GPR83Q9NYM4 423 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 RUVBL1Q9Y265 456 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 VWA7Q9Y334 891 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 ZNF451Q9Y4E5 1061 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 PCDHGB7Q9Y5F8 929 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 FLNCQ14315 2725 aa17.12■□□□□ 0.33
SCAMP4-213ENST00000621748 RP1L1Q8IWN7 2480 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 VSTM2BA6NLU5 285 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 E7ESA3 106 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 C8GP07360 202 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 GSTA2P09210 222 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 MMP11P24347 488 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 RELAQ04206 551 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 FRG1Q14331 258 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 PHKG1Q16816 387 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 PRMT9Q6P2P2 845 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 ADCK2Q7Z695 626 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 ARHGEF39Q8N4T4 335 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 CDKL2Q92772 493 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 CABS1Q96KC9 395 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 SMAD5Q99717 465 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 ATG10Q9H0Y0 220 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 CCDC177Q9NQR7 707 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 PLAAQ9Y263 795 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 PSAT1Q9Y617 370 aa17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 PRRC2CQ9Y520 2896 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-213ENST00000621748 CNTRLQ7Z7A1 2325 aa17.1■□□□□ 0.33
SCAMP4-213ENST00000621748 AGPSO00116 658 aa17.1■□□□□ 0.33
SCAMP4-213ENST00000621748 SOCS6O14544 535 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms