RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 COX7A2P14406 83 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 ACADSP16219 412 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 HNF4AP41235 474 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PPP2CBP62714 309 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PPP2CAP67775 309 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 TRAP1Q12931 704 aaKnown RBP9.6□□□□□ -0.87
VTA1-205ENST00000620996 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
VTA1-205ENST00000620996 COQ5Q5HYK3 327 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PRAMEF14Q5SWL7 426 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PRAMEF13Q5VWM6 474 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 OR52E8Q6IFG1 317 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 GRHL2Q6ISB3 625 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 C11orf96Q7Z7L8 435 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 HID1Q8IV36 788 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CHCHD4Q8N4Q1 142 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 OR56A3Q8NH54 315 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 TSPEARQ8WU66 669 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 CANT1Q8WVQ1 401 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 FIG4Q92562 907 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 COX14Q96I36 57 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 XKR8Q9H6D3 395 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 SLC52A3Q9NQ40 469 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 TAC3Q9UHF0 121 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 PCDHGA11Q9Y5H2 935 aa9.6□□□□□ -0.87
VTA1-205ENST00000620996 FAM149AA5PLN7 773 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 CACNB4O00305 520 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 ANKRD28O15084 1053 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 AP1G1O43747 822 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PRPS2P11908 318 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 AMD1P17707 334 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PSMA4P25789 261 aaKnown RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 HOXD12P35452 270 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 FOXM1Q08050 763 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PWP1Q13610 501 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 ADGRE1Q14246 886 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 HKDC1Q2TB90 917 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 KCTD21Q4G0X4 260 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR4F3Q6IEY1 312 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 GCNT7Q6ZNI0 430 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 DCUN1D3Q8IWE4 304 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PHACTR4Q8IZ21 702 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 LILRA2Q8N149 483 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 SMRP1Q8NCR6 262 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR7G3Q8NG95 312 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR7A2PQ8NGA2 310 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 SLC5A11Q8WWX8 675 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR52A5Q9H2C5 316 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR51B5Q9H339 312 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 DPEP2Q9H4A9 486 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 KCNK12Q9HB15 430 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 ITM2CQ9NQX7 267 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 VAPAQ9P0L0 249 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PCDHA9Q9Y5H5 950 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 MUC22E2RYF6 1773 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 TRBV23OR9-2A0A075B6M9 112 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 C17orf113A0A1B0GUU1 675 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 TCRBV21S2A2A0A5A6 115 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 DHRS12A0PJE2 317 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 NARSO43776 548 aaKnown RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 IL6P05231 212 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 KELP23276 732 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 PSMB5P28074 263 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR4D2P58180 307 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 RHDQ02161 417 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 TAP2Q03519 686 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 BNIP2Q12982 314 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 NRF1Q16656 503 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 C8orf82Q6P1X6 216 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 TMEM53Q6P2H8 277 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 GLB1L3Q8NCI6 653 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 ZNF740Q8NDX6 193 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 OR10A6Q8NH74 314 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 JPH3Q8WXH2 748 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 MAGEB10Q96LZ2 347 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 TRIT1Q9H3H1 467 aaKnown RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 CARS2Q9HA77 564 aaKnown RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 ABCD2Q9UBJ2 740 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 RABL2AQ9UBK7 228 aaPredicted RBP9.59□□□□□ -0.87
VTA1-205ENST00000620996 LRCH1Q9Y2L9 728 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 TICRRQ7Z2Z1 1910 aa9.59□□□□□ -0.87
VTA1-205ENST00000620996 C15orf38-AP3S2A0A0A6YYH1 394 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 A0A1W2PQF6 199 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 TMEM221A6NGB7 291 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 SAC3D1A6NKF1 404 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 OR52A4PA6NMU1 304 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ETHE1O95571 254 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 RPN2P04844 631 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ANXA4P09525 319 aaPredicted RBP9.58□□□□□ -0.88
VTA1-205ENST00000620996 NAT2P11245 290 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 NPPBP16860 134 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 IL10P22301 178 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 MTX3Q5HYI7 312 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 PAGE2BQ5JRK9 111 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ANGPTL8Q6UXH0 198 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 ARPINQ7Z6K5 226 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 GPR180Q86V85 440 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 HORMAD1Q86X24 394 aa9.58□□□□□ -0.88
VTA1-205ENST00000620996 TP53I13Q8NBR0 393 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms