RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PLA2G4EQ3MJ16 856 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 FAM98BQ52LJ0 330 aaKnown RBP24.53■■□□□ 1.52
VEGFC-202ENST00000618562 CYBRD1Q53TN4 286 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 DOK6Q6PKX4 331 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 ADAMTS16Q8TE57 1224 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 VPS50Q96JG6 964 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 SH3GL1Q99961 368 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 C8orf33Q9H7E9 229 aaPredicted RBP24.53■■□□□ 1.52
VEGFC-202ENST00000618562 FBRSQ9HAH7 460 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 C1orf109Q9NX04 203 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 PRKAB1Q9Y478 270 aa24.53■■□□□ 1.52
VEGFC-202ENST00000618562 PLRG1O43660 514 aaKnown RBP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 DFNA5O60443 496 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 SEC22BO75396 215 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 PAK4O96013 591 aaPredicted RBP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 DNTTP04053 509 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 ITPKAP23677 461 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 GRSF1Q12849 480 aaKnown RBP eCLIP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 IRF4Q15306 451 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 PATL1Q86TB9 770 aaKnown RBP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 OR2T12Q8NG77 320 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 OR2L2Q8NH16 312 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 DNAJB8Q8NHS0 232 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 KLK6Q92876 244 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 ACTR8Q9H981 624 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 CIDEBQ9UHD4 219 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 PGRP06401 933 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 MAPK9P45984 424 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 CDK9P50750 372 aaKnown RBP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 NFE2L1Q14494 772 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 AP1ARQ63HQ0 302 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 ABRAXAS1Q6UWZ7 409 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 OR14C36Q8NHC7 312 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 NUDT8Q8WV74 236 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 DNASE1L2Q92874 299 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 FOPNLQ96NB1 174 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 TEX101Q9BY14 249 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 DNAJC11Q9NVH1 559 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 STOX2Q9P2F5 926 aaPredicted RBP24.52■■□□□ 1.52
VEGFC-202ENST00000618562 V9GYQ6 96 aa24.52■■□□□ 1.52
VEGFC-202ENST00000618562 PRR23AA6NEV1 266 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 H0YAE9 185 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 CHRNB3Q05901 458 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 CYP4F3Q08477 520 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 GGTA1PQ4G0N0 100 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 SLC44A4Q53GD3 710 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 PYCR3Q53H96 274 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 USP51Q70EK9 711 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 TP53I13Q8NBR0 393 aaPredicted RBP24.51■■□□□ 1.51
VEGFC-202ENST00000618562 ZNF548Q8NEK5 533 aaPredicted RBP24.51■■□□□ 1.51
VEGFC-202ENST00000618562 MAGEE2Q8TD90 523 aaPredicted RBP24.51■■□□□ 1.51
VEGFC-202ENST00000618562 CCDC138Q96M89 665 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 PKP4Q99569 1192 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 C1QTNF2Q9BXJ5 285 aa24.51■■□□□ 1.51
VEGFC-202ENST00000618562 MGAT4DA6NG13 374 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 MBTPS2O43462 519 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 PRAMEF4O60810 478 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 MT-ND1P03886 318 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 PCSK2P16519 638 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 SLC5A2P31639 672 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 ADPRHP54922 357 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 RPS21P63220 83 aaKnown RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 USP39Q53GS9 565 aaKnown RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 SPANXN4Q5MJ08 99 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 PRAMEF9Q5VWM5 478 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 FAM83HQ6ZRV2 1179 aaPredicted RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 FKBP9P1Q75LS8 142 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 OR52E4Q8NGH9 312 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 DTNBP1Q96EV8 351 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 UGT2B28Q9BY64 529 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 OSBPL6Q9BZF3 934 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 ZNHIT2Q9UHR6 403 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 OR1A2Q9Y585 309 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 CROCCQ5TZA2 2017 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 C1orf105O95561 183 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 SLC16A8O95907 504 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 ASGR2P07307 311 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 CDH15P55291 814 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 SGO1Q5FBB7 561 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 AGTRAPQ6RW13 159 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 TRMT11Q7Z4G4 463 aaKnown RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 FAM9CQ8IZT9 166 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 FBXL20Q96IG2 436 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 YTHDF1Q9BYJ9 559 aaKnown RBP24.5■■□□□ 1.51
VEGFC-202ENST00000618562 NTN4Q9HB63 628 aa24.5■■□□□ 1.51
VEGFC-202ENST00000618562 KCNE1BA0A087WTH5 132 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 A0A1W2PQU0 124 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 TRIM23P36406 574 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 ESRRGP62508 458 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 ADARB1P78563 741 aaKnown RBP24.49■■□□□ 1.51
VEGFC-202ENST00000618562 MRPS21P82921 87 aaKnown RBP24.49■■□□□ 1.51
VEGFC-202ENST00000618562 CPSF6Q16630 551 aaKnown RBP eCLIP24.49■■□□□ 1.51
VEGFC-202ENST00000618562 SUSD1Q6UWL2 747 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 ATL1Q8WXF7 558 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 TMIGD2Q96BF3 282 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 THUMPD3Q9BV44 507 aaKnown RBP24.49■■□□□ 1.51
VEGFC-202ENST00000618562 SHISA7A6NL88 538 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 UPK1AO00322 258 aa24.49■■□□□ 1.51
VEGFC-202ENST00000618562 TRMUO75648 421 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms