RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 TTYH2Q9BSA4 534 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 HGH1Q9BTY7 390 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 KLHL25Q9H0H3 589 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 CLSTN2Q9H4D0 955 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ASB8Q9H765 288 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 UGT1A10Q9HAW8 530 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 NPIPA1Q9UND3 350 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 SNRNP200O75643 2136 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 DCHS2Q6V1P9 2916 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ZNF839A8K0R7 811 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 GABRR3A8MPY1 467 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 BIN1O00499 593 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 FOXS1O43638 330 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 CD48P09326 243 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 EPXP11678 715 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PKMP14618 531 aaKnown RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 MAGP20916 626 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 CD9P21926 228 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ACVR2AP27037 513 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 OPRM1P35372 400 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 TNNT3P45378 269 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 KLK7P49862 253 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 RHAGQ02094 409 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 TYRO3Q06418 890 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNCA-213ENST00000618500 C20orf204Q6ZNR8 217 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 KIF18BQ86Y91 864 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 DND1Q8IYX4 353 aaKnown RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 TAB3Q8N5C8 712 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 OR2L3Q8NG85 312 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 GORASP1Q9BQQ3 440 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PLCD4Q9BRC7 762 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 TRIM7Q9C029 511 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ZNF395Q9H8N7 513 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 TAB2Q9NYJ8 693 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ZNF629Q9UEG4 869 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 CRLS1Q9UJA2 301 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 HRH3Q9Y5N1 445 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ZGRF1Q86YA3 2104 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 A0A0G2JNJ9 132 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 A0A1W2PPV9 198 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 FEZF1A0PJY2 475 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 FAM90A27PA6NNH2 459 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 KPNA5O15131 536 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PRMT3O60678 531 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 CTSVO60911 334 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 SLC25A12O75746 678 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 FPR1P21462 350 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ALAS2P22557 587 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 TIMP3P35625 211 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 AVPR1BP47901 424 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 EFNA3P52797 238 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 DGKQP52824 942 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 SLC26A5P58743 744 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 UBE2HP62256 183 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 NKX6-1P78426 367 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 PPP2R2BQ00005 443 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ACVR1Q04771 509 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 KRTAP1-1Q07627 177 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 RNFT1Q5M7Z0 435 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 HEPHL1Q6MZM0 1159 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 RBM43Q6ZSC3 357 aaKnown RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 ZNF571Q7Z3V5 609 aaPredicted RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 KCTD6Q8NC69 237 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 MAGEC3Q8TD91 643 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 METTL21AQ8WXB1 218 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 LRRC45Q96CN5 670 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 MRFAP1L1Q96HT8 127 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 SEC16BQ96JE7 1060 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 DACH2Q96NX9 599 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 UCN2Q96RP3 112 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 PCNX1Q96RV3 2341 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 VN1R1Q9GZP7 353 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 XKR8Q9H6D3 395 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 KCNK13Q9HB14 408 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 CRIM1Q9NZV1 1036 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 Q9UFV3 132 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 MTRF1LQ9UGC7 380 aaKnown RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 TRPS1Q9UHF7 1281 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 VPS9D1Q9Y2B5 631 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 AAR2Q9Y312 384 aaKnown RBP4.3□□□□□ -1.72
SNCA-213ENST00000618500 FAM215AQ9Y5M1 114 aa4.3□□□□□ -1.72
SNCA-213ENST00000618500 ISM1B1AKI9 464 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 TFECO14948 347 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 TLX2O43763 284 aaPredicted RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 PDHA2P29803 388 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 CMPK1P30085 196 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 PTPN7P35236 360 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 OR1D4P47884 311 aa4.29□□□□□ -1.72
SNCA-213ENST00000618500 EIF3BP55884 814 aaKnown RBP4.29□□□□□ -1.72
SNCA-213ENST00000618500 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms