RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CMTM7Q96FZ5 175 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 PRR11Q96HE9 360 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 AIF1LQ9BQI0 150 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 CD93Q9NPY3 652 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 SDR39U1Q9NRG7 319 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 AIG1Q9NVV5 245 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 GID8Q9NWU2 228 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 TAS2R1Q9NYW7 299 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 CCDC167Q9P0B6 97 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 PCOLCE2Q9UKZ9 415 aa16.2■□□□□ 0.18
TRAPPC3-210ENST00000617904 SPTY2D1-AS1A0A0U1RR47 76 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 E7EQ34 232 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 LSM1O15116 133 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 GSC2O15499 205 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 SLC22A3O75751 556 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CEACAM1P13688 526 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PRPH2P23942 346 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PI4KAP42356 2102 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CPA2P48052 419 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 GRB7Q14451 532 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RPE65Q16518 533 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 SPRED3Q2MJR0 410 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 LYSMD4Q5XG99 296 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PRMT9Q6P2P2 845 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 SLC23A3Q6PIS1 610 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 SCIMPQ6UWF3 145 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 NXPE4Q6UWF7 544 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RINLQ6ZS11 566 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ZFAND4Q86XD8 727 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ASCC3Q8N3C0 2202 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 KIF2BQ8N4N8 673 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 POU5F2Q8N7G0 328 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 GLB1L3Q8NCI6 653 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PPFIBP2Q8ND30 876 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 OR13H1Q8NG92 308 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 OR2L8Q8NGY9 312 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 HMGCLL1Q8TB92 370 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 TSACCQ96A04 125 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 WDR34Q96EX3 536 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PDXPQ96GD0 296 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 MARK4Q96L34 752 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CENPKQ9BS16 269 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 BRINP2Q9C0B6 783 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 KIR3DX1Q9H7L2 352 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ASIC5Q9NY37 505 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PILRBQ9UKJ0 227 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PRPF19Q9UMS4 504 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PCDHB11Q9Y5F2 797 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ST14Q9Y5Y6 855 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 KIR2DS5A0A0G2JLQ3 304 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 A0A0G2JNG1 304 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 A0A1B0GTL3 188 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 H0Y8X5 98 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 KIR2DS3K7RE56 304 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 AIM2O14862 343 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 STAMBPO95630 424 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PDYNP01213 254 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PROS1P07225 676 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 PCNAP12004 261 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 F3P13726 295 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 NPPBP16860 134 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 DDX5P17844 614 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CD38P28907 300 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 HTR6P50406 440 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 NUDT2P50583 147 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CCR8P51685 355 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CLNS1AP54105 237 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RPL38P63173 70 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RACK1P63244 317 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 KIR2DS5Q14953 304 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ALG11Q2TAA5 492 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 COQ5Q5HYK3 327 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 SLCO4C1Q6ZQN7 724 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RBM12BQ8IXT5 1001 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RBM15BQ8NDT2 890 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 TTLQ8NG68 377 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 NEIL2Q969S2 332 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 ROPN1LQ96C74 230 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 MTFMTQ96DP5 389 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 AHSPQ9NZD4 102 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 RUVBL1Q9Y265 456 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CFAP20Q9Y6A4 193 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-210ENST00000617904 CEP192Q8TEP8 1941 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 KCNE1BA0A087WTH5 132 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 FAM234BA2RU67 622 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 ANKDD1BA6NHY2 528 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 PRR19A6NJB7 356 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 C10orf142B7Z368 130 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 NPIPB8E9PQR5 432 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 FOXE1O00358 373 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 NRP2O60462 931 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 VIPP01282 170 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 ENGP17813 658 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 EPORP19235 508 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 GPX3P22352 226 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 GSTM2P28161 218 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 CMPK1P30085 196 aa16.18■□□□□ 0.18
TRAPPC3-210ENST00000617904 DPP6P42658 865 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms