RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PPP2CBP62714 309 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 PPP2CAP67775 309 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 UGT8Q16880 541 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 AASDHQ4L235 1098 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 RUNDC3AQ59EK9 446 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 GLYATQ6IB77 296 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 HORMAD1Q86X24 394 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 GOLM1Q8NBJ4 401 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR10A6Q8NH74 314 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 AURKBQ96GD4 344 aaPredicted RBP16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 ITCHQ96J02 903 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 KCNH6Q9H252 994 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 OSGEPL1Q9H4B0 414 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 RMND5AQ9H871 391 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 MAN2B2Q9Y2E5 1009 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 WDR37Q9Y2I8 494 aa16.73■□□□□ 0.27
PCDHGC3-205ENST00000617641 A0A096LPI6 279 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 KANSL1LA0AUZ9 987 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC31A1O15431 190 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 UBTFL6P0CB48 400 aaPredicted RBP16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 CDH1P12830 882 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 IL10P22301 178 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 BMP8BP34820 402 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 CDKN2CP42773 168 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 FOLH1Q04609 750 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 ERMP1Q7Z2K6 904 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 GPR180Q86V85 440 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 PROSER1Q86XN7 944 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 PHACTR4Q8IZ21 702 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 ZNF740Q8NDX6 193 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 REPS1Q96D71 796 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 SIPA1Q96FS4 1042 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 FBRSQ9HAH7 460 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 CD93Q9NPY3 652 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 KCNK6Q9Y257 313 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 PLEKHM1Q9Y4G2 1056 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 V9GYQ6 96 aa16.72■□□□□ 0.27
PCDHGC3-205ENST00000617641 C2CD4DB7Z1M9 353 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 GPR89AB7ZAQ6 455 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 ERN1O75460 977 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 MYO1DO94832 1006 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 CEACAM5P06731 702 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 GPIP06744 558 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 GPR89BP0CG08 455 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 KIR3DL1P43629 444 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 PAGE2BQ5JRK9 111 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 LRIF1Q5T3J3 769 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 LAS2Q8IYD9 372 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 CHTF18Q8WVB6 975 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 GATA6Q92908 595 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 BIRC7Q96CA5 298 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 REXO4Q9GZR2 422 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 EHD1Q9H4M9 534 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 COQ10BQ9H8M1 238 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 MAGEL2Q9UJ55 1249 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 MOSPD1Q9UJG1 213 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPN2P04844 631 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 ANXA4P09525 319 aaPredicted RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 COX7A2P14406 83 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 PTPN6P29350 595 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 GRSF1Q12849 480 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 ANKRD26P1Q6NSI1 321 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR2T12Q8NG77 320 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 SETD7Q8WTS6 366 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 NSMCE2Q96MF7 247 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 CPPED1Q9BRF8 314 aaPredicted RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 TBCDQ9BTW9 1192 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 TRIT1Q9H3H1 467 aaKnown RBP16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 DMRT3Q9NQL9 472 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 BATF3Q9NR55 127 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 CD207Q9UJ71 328 aa16.71■□□□□ 0.27
PCDHGC3-205ENST00000617641 FAM149AA5PLN7 773 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SCAMP1O15126 338 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 ERGP11308 486 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 PCSK2P16519 638 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF26P17031 533 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 HOXB9P17482 250 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 GGT1P19440 569 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 MTAPQ13126 283 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 MED21Q13503 144 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 HIST2H2ACQ16777 129 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SPIN4Q56A73 249 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 HIST2H2AA3Q6FI13 130 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 LCTLQ6UWM7 567 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 DNAJB8Q8NHS0 232 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 MIEF2Q96C03 454 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 METTL2AQ96IZ6 378 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 NR1H4Q96RI1 486 aaPredicted RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 CIB1Q99828 191 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 APOOQ9BUR5 198 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 C1QTNF7Q9BXJ2 289 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 TAC3Q9UHF0 121 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 ANAPC2Q9UJX6 822 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 ACSL5Q9ULC5 683 aa16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 SAP18O00422 153 aaKnown RBP16.7■□□□□ 0.26
PCDHGC3-205ENST00000617641 RFXANKO14593 260 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms