RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CT55Q8WUE5 264 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 KLHL6Q8WZ60 621 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 RAB11FIP5Q9BXF6 653 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 TWSG1Q9GZX9 223 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 KCNK9Q9NPC2 374 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 LHX9Q9NQ69 397 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 ZNF358Q9NW07 568 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 UTP6Q9NYH9 597 aaKnown RBP14.31□□□□□ -0.12
UBXN1-218ENST00000616865 CD274Q9NZQ7 290 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 PLAGL1Q9UM63 463 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 PDE10AQ9Y233 779 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 OARD1Q9Y530 152 aa14.31□□□□□ -0.12
UBXN1-218ENST00000616865 C21orf140B9A014 251 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 SMIM24O75264 130 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 TIAF1O95411 115 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 GUCA1CO95843 209 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 NELFEP18615 380 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 TAC1P20366 129 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 SHMT2P34897 504 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 CRHR1P34998 444 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 UQCRFS1P47985 274 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 AP1S2P56377 157 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 SLC18A2Q05940 514 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 TSTA3Q13630 321 aaPredicted RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 OR4D1Q15615 310 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 ARMC6Q6NXE6 501 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 IRGCQ6NXR0 463 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 KLHL35Q6PF15 583 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 ISCA2Q86U28 154 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 EXOC3L1Q86VI1 746 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 FBXO15Q8NCQ5 510 aaPredicted RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 OR52E1Q8NGJ3 308 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 ATL1Q8WXF7 558 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 PTERQ96BW5 349 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 ZDHHC12Q96GR4 267 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 CCDC138Q96M89 665 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 MRPL57Q9BQC6 102 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 RAB33BQ9H082 229 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 MRPL46Q9H2W6 279 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 SRMSQ9H3Y6 488 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 CPSF2Q9P2I0 782 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 EPHA6Q9UF33 1036 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 IKZF3Q9UKT9 509 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 PADI1Q9ULC6 663 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 ACTL7BQ9Y614 415 aa14.3□□□□□ -0.12
UBXN1-218ENST00000616865 USP9YO00507 2555 aaPredicted RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 TNRC6AQ8NDV7 1962 aaKnown RBP14.3□□□□□ -0.12
UBXN1-218ENST00000616865 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 NCF1BA6NI72 391 aaPredicted RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 NCF1CA8MVU1 366 aaPredicted RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 HMGB1P1B2RPK0 211 aaPredicted RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 KERAO60938 352 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 DNAJB5O75953 348 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 ANXA5P08758 320 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 TPBGLP0DKB5 382 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 GFAPP14136 432 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 NCF1P14598 390 aaPredicted RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 HSD17B2P37059 387 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 PPP1CAP62136 330 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 TUBB3Q13509 450 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 PHKG1Q16816 387 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 CCDC153Q494R4 210 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 CCSMST1Q4G0I0 132 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 C4orf17Q53FE4 359 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 TECRLQ5HYJ1 363 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 SBSNQ6UWP8 590 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 AMIGO1Q86WK6 493 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 SYTL1Q8IYJ3 562 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 BANPQ8N9N5 519 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 OR4E2Q8NGC2 313 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 RHEBL1Q8TAI7 183 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 ARL8AQ96BM9 186 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 PKP4Q99569 1192 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 SH3GL2Q99962 352 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 TRIM55Q9BYV6 548 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 ACTL8Q9H568 366 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 XKR8Q9H6D3 395 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 PDE7BQ9NP56 450 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 NUDT4Q9NZJ9 180 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 XPR1Q9UBH6 696 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 MID2Q9UJV3 735 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 TMCO1Q9UM00 188 aa14.29□□□□□ -0.12
UBXN1-218ENST00000616865 USP9XQ93008 2570 aaPredicted RBP14.29□□□□□ -0.12
UBXN1-218ENST00000616865 OR6C74A6NCV1 312 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 UBXN8O00124 270 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 MYO1CO00159 1063 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 VPS4BO75351 444 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 UTP20O75691 2785 aaKnown RBP14.28□□□□□ -0.12
UBXN1-218ENST00000616865 RAB28P51157 221 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 PNLIPRP1P54315 467 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 CDKL1Q00532 357 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 PRKAA1Q13131 559 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 TGFBIQ15582 683 aa14.28□□□□□ -0.12
UBXN1-218ENST00000616865 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms