RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 KIAA0408Q6ZU52 694 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TAX1BP1Q86VP1 789 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 CATSPER1Q8NEC5 780 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 ACMSDQ8TDX5 336 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 ZFPM2Q8WW38 1151 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TSNARE1Q96NA8 513 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 SLC6A20Q9NP91 592 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 IL17CQ9P0M4 197 aa16.89■□□□□ 0.29
TRAPPC3-209ENST00000616395 TMEM120BA0PK00 339 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 GSAPA4D1B5 854 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 TRIM49D1C9J1S8 452 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 C19orf84I3L1E1 186 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 CCL22O00626 93 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 MAP3K7O43318 606 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 PVRP15151 417 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 GCAP28676 217 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 HMGCLP35914 325 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 CCT5P48643 541 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 EFTUD2Q15029 972 aaKnown RBP eCLIP16.88■□□□□ 0.299e-8■■■■■ 28.3
TRAPPC3-209ENST00000616395 METRNLQ641Q3 311 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 RPUSD3Q6P087 351 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 GFRALQ6UXV0 394 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 PACS1Q6VY07 963 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 CDHR3Q6ZTQ4 885 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 STYXQ8WUJ0 223 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 MAGEB10Q96LZ2 347 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 NSRP1Q9H0G5 558 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 EPS8L2Q9H6S3 715 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 IL26Q9NPH9 171 aa16.88■□□□□ 0.29
TRAPPC3-209ENST00000616395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■■□ 22.9
TRAPPC3-209ENST00000616395 ZCWPW2A0A1B0GU75 182 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 OR2AG2A6NM03 316 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 GAPDHSO14556 408 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 COPEO14579 308 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 CD63P08962 238 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 CHN1P15882 459 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 KRT4P19013 534 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 PRDX3P30048 256 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 SPAM1P38567 509 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 DCDP81605 110 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 HSP90AA5PQ58FG0 334 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 IRAK1BP1Q5VVH5 260 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 MTFR2Q6P444 385 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 TMEM220Q6QAJ8 160 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 TMEM207Q6UWW9 146 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 SDCCAG8Q86SQ7 713 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 GPR135Q8IZ08 494 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 NAT14Q8WUY8 206 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 NR4A3Q92570 626 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 PITPNM3Q9BZ71 974 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 SH3BGRL2Q9UJC5 107 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 NAV3Q8IVL0 2385 aa16.87■□□□□ 0.29
TRAPPC3-209ENST00000616395 MYO7BQ6PIF6 2116 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A9O60656 530 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 SHOX2O60902 331 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 FAM155BO75949 473 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 VAPBO95292 243 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 ERVK-10P10266 1014 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 CD1EP15812 388 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A6P19224 532 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A1P22309 533 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A4P22310 534 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 NMBRP28336 390 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 SERPINB8P50452 374 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 SLC12A2P55011 1212 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 TMPRSS15P98073 1019 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 TAF1AQ15573 450 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 MRNIPQ6NTE8 343 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 RHBDD2Q6NTF9 364 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 MRPL14Q6P1L8 145 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 XKRXQ6PP77 449 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 STRA8Q7Z7C7 330 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 CYP4X1Q8N118 509 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 ANKRD42Q8N9B4 389 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 OR4K2Q8NGD2 314 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 OR1N1Q8NGS0 311 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 OR13C4Q8NGS5 318 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 MFSD3Q96ES6 412 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 C14orf79Q96F83 325 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 TAAR6Q96RI8 345 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 TRIM56Q9BRZ2 755 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A7Q9HAW7 530 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A10Q9HAW8 530 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 UGT1A8Q9HAW9 530 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 IARS2Q9NSE4 1012 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 DHCR7Q9UBM7 475 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 FKBPLQ9UIM3 349 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 VPS9D1Q9Y2B5 631 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 ABCA2Q9BZC7 2435 aa16.86■□□□□ 0.29
TRAPPC3-209ENST00000616395 GLYATL1P3A0A0U1RQE8 302 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 H3BMH7 237 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 MATN2O00339 956 aa16.85■□□□□ 0.29
TRAPPC3-209ENST00000616395 STX7O15400 261 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms