RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 THOC5Q13769 683 aaKnown RBP18.08■□□□□ 0.49
CDX1-202ENST00000616154 CRYMQ14894 314 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 MORF4L2Q15014 288 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 WASHC2DQ5SRD0 308 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 B3GNTL1Q67FW5 361 aaPredicted RBP18.08■□□□□ 0.49
CDX1-202ENST00000616154 FRMPD2BQ6IN97 320 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 PRMT9Q6P2P2 845 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 ZNF549Q6P9A3 640 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 RNF44Q7L0R7 432 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 CNTN4Q8IWV2 1026 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 PARP9Q8IXQ6 854 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 DTWD1Q8N5C7 304 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.08■□□□□ 0.49
CDX1-202ENST00000616154 MAGEC3Q8TD91 643 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 SKA2Q8WVK7 121 aaPredicted RBP18.08■□□□□ 0.49
CDX1-202ENST00000616154 FOPNLQ96NB1 174 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 MIPEPQ99797 713 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 EBNA1BP2Q99848 306 aaKnown RBP18.08■□□□□ 0.49
CDX1-202ENST00000616154 FAM167BQ9BTA0 163 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 SPATA7Q9P0W8 599 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 GALPQ9UBC7 116 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 FBXO5Q9UKT4 447 aa18.08■□□□□ 0.49
CDX1-202ENST00000616154 RUVBL2Q9Y230 463 aaKnown RBP18.08■□□□□ 0.49
CDX1-202ENST00000616154 A0A1W2PPV9 198 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 PSIP1O75475 530 aaKnown RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 SEC31AO94979 1220 aaKnown RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 MED26O95402 600 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 CHRM3P20309 590 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 COL8A1P27658 744 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 DCTP40126 519 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 RPL21P46778 160 aaKnown RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 CARSP49589 748 aaKnown RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 SLC7A5Q01650 507 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 CTBP1Q13363 440 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 NAA25Q14CX7 972 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 MSS51Q4VC12 460 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 ACSBG2Q5FVE4 666 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 ZNF787Q6DD87 383 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 GALNT7Q86SF2 657 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 KCNMB4Q86W47 210 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 FBXO15Q8NCQ5 510 aaPredicted RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 OR2A1Q8NGT9 310 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 GIMAP7Q8NHV1 300 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 DNAJB14Q8TBM8 379 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 CRB3Q9BUF7 120 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 EPS8L2Q9H6S3 715 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 PLAC1Q9HBJ0 212 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 ZNF304Q9HCX3 659 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 C20orf96Q9NUD7 363 aaPredicted RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 GRHL1Q9NZI5 618 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 UTP11Q9Y3A2 253 aaKnown RBP18.07■□□□□ 0.48
CDX1-202ENST00000616154 MAU2Q9Y6X3 613 aa18.07■□□□□ 0.48
CDX1-202ENST00000616154 LOC105369274A0A096LPK9 316 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 LOC102723532A0A0G2JNH3 316 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 A0A0J9YVX5 310 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 KRT87PA6NCN2 255 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 MYO1CO00159 1063 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 EIF3FO00303 357 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 E2F3O00716 465 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 NRP2O60462 931 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 KLC1Q07866 573 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 DHX9Q08211 1270 aaKnown RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 Q0VFX4 171 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 ZNF169Q14929 603 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 HIBCHQ6NVY1 386 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 CNSTQ6PJW8 725 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 OR4N4Q8N0Y3 316 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 C2CD4AQ8NCU7 369 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 STT3BQ8TCJ2 826 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 LRRC39Q96DD0 335 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 SNF8Q96H20 258 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 THOC3Q96J01 351 aaKnown RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 SLC30A3Q99726 388 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 FBXO6Q9NRD1 293 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 WHRNQ9P202 907 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 ZNF282Q9UDV7 671 aaPredicted RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 ZC3H7BQ9UGR2 993 aaKnown RBP18.06■□□□□ 0.48
CDX1-202ENST00000616154 DHRS7Q9Y394 339 aa18.06■□□□□ 0.48
CDX1-202ENST00000616154 IGLV3-12A0A075B6K2 115 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 OR2A25A4D2G3 310 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 ARHGEF33A8MVX0 844 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 E5RI56 91 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 HPP00738 406 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 ENO3P13929 434 aaPredicted RBP18.05■□□□□ 0.48
CDX1-202ENST00000616154 ACPPP15309 386 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 OCA2Q04671 838 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 ARHGAP19Q14CB8 494 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 TLR1Q15399 786 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 KLHL38Q2WGJ6 581 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 TTLL9Q3SXZ7 439 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 HSP90AA5PQ58FG0 334 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.05■□□□□ 0.48
CDX1-202ENST00000616154 SPANXN3Q5MJ09 141 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 ISLR2Q6UXK2 745 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 KIAA0408Q6ZU52 694 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 GRHL3Q8TE85 626 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 WDR83Q9BRX9 315 aaKnown RBP18.05■□□□□ 0.48
CDX1-202ENST00000616154 ANKZF1Q9H8Y5 726 aa18.05■□□□□ 0.48
CDX1-202ENST00000616154 CROCCQ5TZA2 2017 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms