RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ATXN2Q99700 1313 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 NPIPB15A6NHN6 443 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 A8MUA0 341 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 XKRYO14609 159 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 MFN2O95140 757 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 NR2F6P10588 404 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ACTR3P61158 418 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 EMX2Q04743 252 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PCLAFQ15004 111 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 INAQ16352 499 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TECRLQ5HYJ1 363 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PQLC1Q8N2U9 271 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 SMYD1Q8NB12 490 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PIGXQ8TBF5 258 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PMEPA1Q969W9 287 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 SLC35A5Q9BS91 424 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 OSBPL11Q9BXB4 747 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 TBL1XR1Q9BZK7 514 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RACGAP1Q9H0H5 632 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RPRD1BQ9NQG5 326 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ARHGEF3Q9NR81 526 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 FAM120CQ9NX05 1096 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RHBDL2Q9NX52 303 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 P2RX2Q9UBL9 471 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 C15orf41Q9Y2V0 281 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PCDHB3Q9Y5E6 796 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 MYH7BA7E2Y1 1941 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 DLGAP3O95886 979 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 HLA-FP30511 346 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ITGA1P56199 1179 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 HSF5Q4G112 596 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 JAZF1Q86VZ6 243 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 PLXDC1Q8IUK5 500 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 CCDC103Q8IW40 242 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 OR56A1Q8NGH5 318 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 RTP3Q9BQQ7 232 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 EBF4Q9BQW3 602 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 APOOQ9BUR5 198 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 KLHL1Q9NR64 748 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 MTMR10Q9NXD2 777 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ACTL7AQ9Y615 435 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 KIAA1551Q9HCM1 1747 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF831Q5JPB2 1677 aa9.16□□□□□ -0.94
CLTCL1-208ENST00000615606 FADS2P1A8MWK0 482 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 GFRA2O00451 464 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 B4GALT2O60909 372 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 RFPL1O75677 317 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 HSD3B1P14060 373 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 HSD3B2P26439 372 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 IRS1P35568 1242 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 SOX9P48436 509 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 DSTNP60981 165 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 MBTPS1Q14703 1052 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF542PQ5EBM4 170 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 LYSMD4Q5XG99 296 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 PARS2Q7L3T8 475 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 BPIFB6Q8NFQ5 453 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 Q9N2J8 555 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 ERGIC3Q9Y282 383 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 SPO11Q9Y5K1 396 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 GPR89AB7ZAQ6 455 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 TIPRLO75663 272 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 RSL1D1O76021 490 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 GPR89BP0CG08 455 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 CCR10P46092 362 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 CLCN7P51798 805 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 EEFSECP57772 596 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 XIAPP98170 497 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 NEDD8Q15843 81 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 NAIF1Q69YI7 327 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 NADSYN1Q6IA69 706 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 PACS2Q86VP3 889 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 ZDHHC1Q8WTX9 485 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 C10orf82Q8WW14 230 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 TOE1Q96GM8 510 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 PDP1Q9P0J1 537 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 UGT2B11O75310 529 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 STATHP02808 62 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 MSX2P35548 267 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 VSX2P58304 361 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 RPS15AP62244 130 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 ZNF763Q0D2J5 394 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 TRIM25Q14258 630 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 EGFLAMQ63HQ2 1017 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 OR4F3Q6IEY1 312 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 RINLQ6ZS11 566 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 CAMK1GQ96NX5 476 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 TGM7Q96PF1 710 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 SHANK3Q9BYB0 1731 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 KCNN2Q9H2S1 579 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 ACTL8Q9H568 366 aa9.15□□□□□ -0.94
CLTCL1-208ENST00000615606 TNFRSF10BO14763 440 aa9.15□□□□□ -0.95
CLTCL1-208ENST00000615606 MYCLP1P12525 358 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms