RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 MAGEB18Q96M61 343 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 PPM1MQ96MI6 270 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TMEM74Q96NL1 305 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 PITHD1Q9GZP4 211 aaPredicted RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 MID1IP1Q9NPA3 183 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 IGHV5-51A0A0C4DH38 117 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 IGKV1-8A0A0C4DH67 115 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 SPAARA0A1B0GVQ0 90 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 A8MU76 341 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 PPP6CO00743 305 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ESRRBO95718 433 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ANKRD34CP0C6C1 535 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 FTH1P19P0C7X4 201 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 THRAP10827 490 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 PVRP15151 417 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ST6GAL1P15907 406 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 MDH1P40925 334 aaKnown RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 CSNK1G2P78368 415 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 HSD11B2P80365 405 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 INSM1Q01101 510 aaPredicted RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 BST1Q10588 318 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 TRAF3Q13114 568 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 E2F2Q14209 437 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 GPRIN3Q6ZVF9 776 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ARHGAP22Q7Z5H3 698 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 SLCO6A1Q86UG4 719 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 PAQR7Q86WK9 346 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 FAM129CQ86XR2 697 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 MYLK4Q86YV6 388 aaPredicted RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 C19orf47Q8N9M1 422 aaKnown RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 L3MBTL4Q8NA19 623 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 OR4F6Q8NGB9 312 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 KLHL6Q8WZ60 621 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 UBE2E3Q969T4 207 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 GRAMD1AQ96CP6 724 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 CHRNA10Q9GZZ6 450 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 KLHL25Q9H0H3 589 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ZNF768Q9H5H4 540 aaKnown RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 PDE7BQ9NP56 450 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 THAP1Q9NVV9 213 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 SOHLH2Q9NX45 425 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.12□□□□□ -0.15
CD48-203ENST00000613788 KLHL20Q9Y2M5 609 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 ASXL3Q9C0F0 2248 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 RP1P56715 2156 aa14.12□□□□□ -0.15
CD48-203ENST00000613788 OR2A25A4D2G3 310 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 UBFD1O14562 309 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 HGSO14964 777 aaPredicted RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 PRAMEF4O60810 478 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 DKK1O94907 266 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 KCNK5O95279 499 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 HGFP14210 728 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 JUPP14923 745 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 VARSP26640 1264 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 ERVPABLB-1P60509 514 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 SH3BP2P78314 561 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 SLBPQ14493 270 aaKnown RBP eCLIP14.11□□□□□ -0.15
CD48-203ENST00000613788 GGTA1PQ4G0N0 100 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 ZC3H12BQ5HYM0 836 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 TMTC4Q5T4D3 741 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 PHF19Q5T6S3 580 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 PRAMEF9Q5VWM5 478 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 FCRL6Q6DN72 434 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 GRHL2Q6ISB3 625 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 DHRS13Q6UX07 377 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 SYVN1Q86TM6 617 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 ALYREFQ86V81 257 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 KIRREL3Q8IZU9 778 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 LSMEM2Q8N112 164 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 AGAP11Q8TF27 550 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 CCDC74BQ96LY2 380 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 CDK15Q96Q40 435 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 ILKAPQ9H0C8 392 aaPredicted RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 NT5DC2Q9H857 520 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 GEMIN8Q9NWZ8 242 aaKnown RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 TRPS1Q9UHF7 1281 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 RNF11Q9Y3C5 154 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 PCDHGA11Q9Y5H2 935 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 PCM1Q15154 2024 aa14.11□□□□□ -0.15
CD48-203ENST00000613788 PTPRZ1P23471 2315 aaPredicted RBP14.11□□□□□ -0.15
CD48-203ENST00000613788 TRBC2A0A5B9 178 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 ITM2AO43736 263 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SNNO75324 88 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 CRCPO75575 148 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 OR4F21O95013 312 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 ENO1P06733 434 aaKnown RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 CHRNGP07510 517 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 FGF4P08620 206 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 NELFEP18615 380 aaKnown RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 PLA2G5P39877 138 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 MLLT3P42568 568 aaPredicted RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 CCR10P46092 362 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 SEPHS1P49903 392 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 INHBCP55103 352 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 RPS15AP62244 130 aaKnown RBP14.1□□□□□ -0.15
CD48-203ENST00000613788 GUCY1A3Q02108 690 aa14.1□□□□□ -0.15
CD48-203ENST00000613788 ZIC1Q15915 447 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms