RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 FAM237BA0A1B0GVD1 139 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 MAGEB16A2A368 324 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 IDSB3KWA1 339 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 PCDH17O14917 1159 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 SLC16A8O95907 504 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 EZRP15311 586 aaKnown RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 CXCR2P25025 360 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 SOX11P35716 441 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 VPS41P49754 854 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 EMP2P54851 167 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 ABATP80404 500 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 GPS1Q13098 491 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 TSTA3Q13630 321 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 RPUSD3Q6P087 351 aaKnown RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 ARHGEF39Q8N4T4 335 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 ZNF480Q8WV37 535 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 RERGQ96A58 199 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 SLC30A3Q99726 388 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 TRIM56Q9BRZ2 755 aaKnown RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 MKKSQ9NPJ1 570 aaPredicted RBP16.9■□□□□ 0.3
SSBP1-215ENST00000612337 SAMD15Q9P1V8 674 aa16.9■□□□□ 0.3
SSBP1-215ENST00000612337 CSMD1Q96PZ7 3565 aa16.89■□□□□ 0.3
SSBP1-215ENST00000612337 IGHV1-45A0A0A0MS14 117 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 CTAGE9A4FU28 777 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 E7ENX8 843 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 TXNDC9O14530 226 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 SERPINA7P05543 415 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 ANXA5P08758 320 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 PRR35P0CG20 571 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 MLNP12872 115 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 CXCR5P32302 372 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 ARG2P78540 354 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 TAP2Q03519 686 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 DHX34Q14147 1143 aaKnown RBP16.89■□□□□ 0.29
SSBP1-215ENST00000612337 ANKRD22Q5VYY1 191 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 ZNF470Q6ECI4 717 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 FAM180AQ6UWF9 173 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 AMER3Q8N944 861 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 PPFIBP2Q8ND30 876 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 CATSPER1Q8NEC5 780 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 GIMAP7Q8NHV1 300 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 BRIX1Q8TDN6 353 aaKnown RBP16.89■□□□□ 0.29
SSBP1-215ENST00000612337 ASB11Q8WXH4 323 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 PSMF1Q92530 271 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 KCNJ9Q92806 393 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 MMABQ96EY8 250 aaPredicted RBP16.89■□□□□ 0.29
SSBP1-215ENST00000612337 SLX1AQ9BQ83 275 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 DRC3Q9H069 523 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 OSGIN2Q9Y236 505 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
SSBP1-215ENST00000612337 SDR42E2A6NKP2 422 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 FFAR3O14843 346 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 GPR42O15529 346 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 LRRTM2O43300 516 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 FOXS1O43638 330 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 KRT14P02533 472 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 HEXBP07686 556 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 MPC1LP0DKB6 136 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 ENO3P13929 434 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 EEF1A2Q05639 463 aaKnown RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 THOC5Q13769 683 aaKnown RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 FAM53BQ14153 422 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 RIPOR1Q6ZS17 1223 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 DENND6AQ8IWF6 608 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 LRRC56Q8IYG6 542 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 BCORP1Q8N888 145 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 MCUQ8NE86 351 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 OR1N1Q8NGS0 311 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 ZNF669Q96BR6 464 aaPredicted RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 EBNA1BP2Q99848 306 aaKnown RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 CCDC68Q9H2F9 335 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 XAB2Q9HCS7 855 aaKnown RBP16.88■□□□□ 0.29
SSBP1-215ENST00000612337 RIC8BQ9NVN3 520 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 PTGFRNQ9P2B2 879 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 PCYOX1Q9UHG3 505 aa16.88■□□□□ 0.29
SSBP1-215ENST00000612337 LOC102723996A0A087X1L8 192 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 ZCWPW2A0A1B0GU75 182 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 DYTNA2CJ06 578 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 GFYI3L273 518 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 SMAPO00193 183 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 HAT1O14929 419 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 P2RX6O15547 441 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 ZBTB14O43829 449 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 BMP10O95393 424 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 F7P08709 466 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-215ENST00000612337 TNFSF10P50591 281 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 PER3P56645 1201 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 CTBP1Q13363 440 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 CUL1Q13616 776 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 ZNF549Q6P9A3 640 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 HAS2Q92819 552 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 SERPINB12Q96P63 405 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 FBXO6Q9NRD1 293 aaPredicted RBP16.87■□□□□ 0.29
SSBP1-215ENST00000612337 OLAHQ9NV23 265 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 DHRS7Q9Y394 339 aa16.87■□□□□ 0.29
SSBP1-215ENST00000612337 MRPS2Q9Y399 296 aaKnown RBP16.87■□□□□ 0.29
SSBP1-215ENST00000612337 ABCA12Q86UK0 2595 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms