RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 AMD1P17707 334 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 CAPN3P20807 821 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 JAK1P23458 1154 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 IL12AP29459 219 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 RAP1GDS1P52306 607 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 POLR2JP52435 117 aaKnown RBP11.85□□□□□ -0.51
CBWD1-220ENST00000612045 KCNK10P57789 538 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 PTGR1Q14914 329 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 ICE2Q659A1 982 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 CYB5D1Q6P9G0 228 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 IYDQ6PHW0 289 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 TAF8Q7Z7C8 310 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 SCUBE1Q8IWY4 988 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 TMEFF1Q8IYR6 380 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 ULK2Q8IYT8 1036 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 KRT78Q8N1N4 520 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 ZNF740Q8NDX6 193 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 OR2A1Q8NGT9 310 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 C1orf216Q8TAB5 229 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 TSPEARQ8WU66 669 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 LCN9Q8WX39 176 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 UBE2E3Q969T4 207 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 SPDL1Q96EA4 605 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 CUEDC1Q9NWM3 386 aaPredicted RBP11.85□□□□□ -0.51
CBWD1-220ENST00000612045 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 OR6C2Q9NZP2 312 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 EML5Q05BV3 1969 aa11.85□□□□□ -0.51
CBWD1-220ENST00000612045 H7BY64 318 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 TLR4O00206 839 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 FOXE1O00358 373 aaPredicted RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 MRASO14807 208 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 ANGPT2O15123 496 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PRICKLE3O43900 615 aaPredicted RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 ETHE1O95571 254 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 ACPPP15309 386 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 JUNDP17535 347 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 MAPK1P28482 360 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 SHMT2P34897 504 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 CCR8P51685 355 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PRDX1Q06830 199 aaKnown RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 TBL3Q12788 808 aaKnown RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 FBXW10Q5XX13 1052 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 TMIGD1Q6UXZ0 262 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 RETREG3Q86VR2 466 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 AMIGO1Q86WK6 493 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PGAM4Q8N0Y7 254 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 OR4E2Q8NGC2 313 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 JPH3Q8WXH2 748 aaPredicted RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 METTL2AQ96IZ6 378 aaKnown RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 APOLD1Q96LR9 279 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 LRRC61Q9BV99 259 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 WDR41Q9HAD4 459 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 PRM3Q9NNZ6 103 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 APOBEC3BQ9UH17 382 aaKnown RBP11.84□□□□□ -0.51
CBWD1-220ENST00000612045 BAIAP2L1Q9UHR4 511 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 DLGAP4Q9Y2H0 992 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 NDUFAF1Q9Y375 327 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 LAMA1P25391 3075 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
CBWD1-220ENST00000612045 A0A1W2PP18 115 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 MGRN1O60291 552 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 CSF2P04141 144 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 PRPS2P11908 318 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 XRCC1P18887 633 aaPredicted RBP11.83□□□□□ -0.51
CBWD1-220ENST00000612045 CXCR2P25025 360 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 PEBP1P30086 187 aaKnown RBP11.83□□□□□ -0.51
CBWD1-220ENST00000612045 HOXA6P31267 233 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 PIK3CBP42338 1070 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 C1orf61Q13536 156 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 COQ5Q5HYK3 327 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 NOXRED1Q6NXP6 359 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 PCYOX1LQ8NBM8 494 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 OR4K1Q8NGD4 311 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 VPS33AQ96AX1 596 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 FCRL1Q96LA6 429 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 NECAB3Q96P71 396 aaPredicted RBP11.83□□□□□ -0.51
CBWD1-220ENST00000612045 AIF1LQ9BQI0 150 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.51
CBWD1-220ENST00000612045 DMRT3Q9NQL9 472 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 SPHK1Q9NYA1 384 aa11.83□□□□□ -0.51
CBWD1-220ENST00000612045 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 MYO15AQ9UKN7 3530 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 IGKV1-8A0A0C4DH67 115 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 CCDC163A0A0D9SF12 145 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 OR5K4A6NMS3 321 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 CFLARO15519 480 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 SH3BGRLO75368 114 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 VIPP01282 170 aa11.83□□□□□ -0.52
CBWD1-220ENST00000612045 NME1P15531 152 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms