RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 EPHA5P54756 1037 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 EEFSECP57772 596 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 DNAJB13P59910 316 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 VBP1P61758 197 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CYP4F8P98187 520 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SLC10A2Q12908 348 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 SRSF5Q13243 272 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 SQSTM1Q13501 440 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 ASAH1Q13510 395 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KEAP1Q14145 624 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TCEA2Q15560 299 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 MAPK11Q15759 364 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 GRK1Q15835 563 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KCTD19Q17RG1 926 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 LDLRAP1Q5SW96 308 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SDHAF4Q5VUM1 108 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PEAR1Q5VY43 1037 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 C9orf57Q5W0N0 161 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TYW3Q6IPR3 259 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 RETSATQ6NUM9 610 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PMF1Q6P1K2 205 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PKN3Q6P5Z2 889 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 BRAT1Q6PJG6 821 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 FIP1L1Q6UN15 594 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 ZPBP2Q6X784 338 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 GAREM2Q75VX8 874 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 MTSS1LQ765P7 747 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 RRM2BQ7LG56 351 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 STRADAQ7RTN6 431 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PIWIL3Q7Z3Z3 882 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 PIWIL4Q7Z3Z4 852 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 KRT77Q7Z794 578 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CLEC14AQ86T13 490 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SYVN1Q86TM6 617 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CCDC190Q86UF4 302 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 LRRTM3Q86VH5 581 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 AMIGO1Q86WK6 493 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KRT73Q86Y46 540 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CPNE8Q86YQ8 564 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 MAP4K3Q8IVH8 894 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 IGDCC3Q8IVU1 814 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CDKL3Q8IVW4 592 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 C1orf210Q8IVY1 113 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TCEAL8Q8IYN2 117 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CHPFQ8IZ52 775 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 RDH10Q8IZV5 341 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TAGAPQ8N103 731 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 VWA5B2Q8N398 1253 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SYNPOQ8N3V7 929 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PARP16Q8N5Y8 322 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 GDPD1Q8N9F7 314 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KDM1BQ8NB78 822 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SUMF1Q8NBK3 374 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TMEM35BQ8NCS4 154 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 CHDHQ8NE62 594 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 OR52E4Q8NGH9 312 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 ZNF461Q8TAF7 563 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TEX47Q8TBZ9 253 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 MAGEE2Q8TD90 523 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 FAR1Q8WVX9 515 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KAT5Q92993 513 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SLC38A4Q969I6 547 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 DACT3Q96B18 629 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 TESCQ96BS2 214 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TBC1D20Q96BZ9 403 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TUBGCP3Q96CW5 907 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 ZC3HAV1LQ96H79 300 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 HEXIM2Q96MH2 286 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 MUS81Q96NY9 551 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SERPINB11Q96P15 392 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TRMOQ9BU70 441 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TTLL2Q9BWV7 592 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 KLF16Q9BXK1 252 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 SDCBP2Q9H190 292 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 MUC3BQ9H195 1237 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 DCSTAMPQ9H295 470 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 SPNS1Q9H2V7 528 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 FAM83DQ9H4H8 585 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 LDAHQ9H6V9 325 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 C8orf33Q9H7E9 229 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 UCK1Q9HA47 277 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PARD6AQ9NPB6 346 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 FANCFQ9NPI8 374 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 IFT46Q9NQC8 304 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 DYRK4Q9NR20 520 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PRMT8Q9NR22 394 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 PCDHB16Q9NRJ7 776 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 OPTCQ9UBM4 332 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 AFF4Q9UHB7 1163 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 MAGEL2Q9UJ55 1249 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 ELF5Q9UKW6 265 aaPredicted RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 INTS6Q9UL03 887 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 RAB23Q9ULC3 237 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 TBX20Q9UMR3 447 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 NDRG2Q9UN36 371 aaKnown RBP4.94□□□□□ -1.62
SSX9-202ENST00000608568 NME7Q9Y5B8 376 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 ORC6Q9Y5N6 252 aa4.94□□□□□ -1.62
SSX9-202ENST00000608568 PMF1-BGLAPU3KQ54 211 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms