RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NELL1Q92832 810 aa16.74■□□□□ 0.27
PPFIA3-207ENST00000602716 UCKL1Q9NWZ5 548 aa16.74■□□□□ 0.27
PPFIA3-207ENST00000602716 TRPS1Q9UHF7 1281 aa16.74■□□□□ 0.27
PPFIA3-207ENST00000602716 POLG2Q9UHN1 485 aa16.74■□□□□ 0.27
PPFIA3-207ENST00000602716 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 B4DGG1 531 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 EBLN1P0CF75 366 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 HGFP14210 728 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 DOC2AQ14183 400 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 KRT33BQ14525 404 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 ABRAXAS2Q15018 415 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 ZNF423Q2M1K9 1284 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 PIGGQ5H8A4 983 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 PRAMEF13Q5VWM6 474 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 NXNQ6DKJ4 435 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 PQLC1Q8N2U9 271 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 GALNT15Q8N3T1 639 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 AFAP1L2Q8N4X5 818 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 LMX1AQ8TE12 382 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 RCN3Q96D15 328 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 CATSPER2Q96P56 530 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 BTBD9Q96Q07 612 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 NUSAP1Q9BXS6 441 aaKnown RBP16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 MVB12BQ9H7P6 319 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 C6orf203Q9P0P8 240 aaPredicted RBP16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 TAC3Q9UHF0 121 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 PACSIN3Q9UKS6 424 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 DMDP11532 3685 aa16.73■□□□□ 0.27
PPFIA3-207ENST00000602716 TNRC6BQ9UPQ9 1833 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 TRPC5OSA6NMA1 111 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 CLDN9O95484 217 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 RAB28P51157 221 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 KIF19Q2TAC6 998 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 SGO1Q5FBB7 561 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 XKR7Q5GH72 579 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 ZNF761Q86XN6 746 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 ZNF548Q8NEK5 533 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 CXorf40BQ96DE9 158 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 SLC45A3Q96JT2 553 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 CDRT15Q96T59 188 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 KIR3DX1Q9H7L2 352 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 CUEDC1Q9NWM3 386 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 SPHK1Q9NYA1 384 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 SNX11Q9Y5W9 270 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 NRP2O60462 931 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 AVPR2P30518 371 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 HMOX2P30519 316 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 BLKP51451 505 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 C21orf59P57076 290 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 UBE2IP63279 158 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 MEF2AQ02078 507 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 IRF8Q02556 426 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 XKR6Q5GH73 641 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 SLCO4C1Q6ZQN7 724 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 ST13P4Q8IZP2 240 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 PGAM4Q8N0Y7 254 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 L3MBTL4Q8NA19 623 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 FAM46DQ8NEK8 389 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 ZFAND2BQ8WV99 257 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 MTFMTQ96DP5 389 aaKnown RBP16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 AKTIPQ9H8T0 292 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 FBXO4Q9UKT5 387 aa16.72■□□□□ 0.27
PPFIA3-207ENST00000602716 MANBAO00462 879 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 CDH1P12830 882 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 XRCC1P18887 633 aaPredicted RBP16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 NEK2P51955 445 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 MAZP56270 477 aaKnown RBP16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 ROR2Q01974 943 aaKnown RBP16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 GPR18Q14330 331 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 ARHGAP19Q14CB8 494 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 MMEL1Q495T6 779 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 GGTA1PQ4G0N0 100 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 IL27RAQ6UWB1 636 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 PILRBQ9UKJ0 227 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 DTNAQ9Y4J8 743 aa16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 COPG1Q9Y678 874 aaKnown RBP16.71■□□□□ 0.27
PPFIA3-207ENST00000602716 ALDOCP09972 364 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SP9P0CG40 484 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 CEACAM7Q14002 265 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 FLOT2Q14254 428 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 LPAL2Q16609 132 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 DEFB133Q30KQ1 61 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 GRAMD1BQ3KR37 738 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 Q6ZSR9 355 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 LARP4Q71RC2 724 aaKnown RBP eCLIP16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SFRP1Q8N474 314 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 ICA1LQ8NDH6 482 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 OR2L8Q8NGY9 312 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 ZDHHC1Q8WTX9 485 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 PIGKQ92643 395 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 CPNE7Q9UBL6 633 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 HEBP2Q9Y5Z4 205 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 YY2O15391 372 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 JUPP14923 745 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 DPP6P42658 865 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 CTSKP43235 329 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 HMGCS1Q01581 520 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms